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. Author manuscript; available in PMC: 2016 Jan 1.
Published in final edited form as: J Proteomics. 2014 Aug 27;112:38–52. doi: 10.1016/j.jprot.2014.08.007

Table 1.

Protein down-regulated in NgBR knockdown tumor cells

Category Accession number Gene name Protein Description Protein abundance ratio
KD1/NS1 KD2/NS2
Extracellular markers IPI00297160.4 CD44 cell surface glycoprotein CD44 0.180 0.189
IPI00011302.1 CD59 cell surface glycoprotein CD59 0.393 0.698
IPI00298851.4 CD151 cell surface glycoprotein CD151 0.312 0.309
IPI00179700.3 HMGA1 Isoform HMG-I of High mobility group protein 0.519 0.385
Cytoskeleton proteins IPI00418471.6 Virmentin intermediate filament protein 0.520 0.747
IPI00008603.1 ACTA2 aortic smooth muscle actin 0.613 0.812
IPI00032313.1 S100A4 Calcium-binding protein S100A4 0.260 0.546
IPI00027463.1 S100A6 Calcium-binding protein 0.524 0.461
IPI00183695.9 S100A10 Calcium-binding protein 0.314 0.598
IPI00013895.1 S100A11 Calcium-binding protein 0.423 0.338
IPI00218918.5 ANXA1 Annexin A1 0.553 0.345
IPI00418169.3 ANXA2 annexin A2 isoform 1 0.394 0.289
IPI00024095.3 ANXA3 Annexin A3 0.393 0.239
IPI00002459.4 ANXA6 annexin VI isoform 2 0.630 0.485
IPI00008868.3 MAP1B Microtubule-associated protein 1B 0.312 0.463
IPI00302592.2 FLNA Isoform 2 of Filamin-A 0.480 0.420
IPI00289334.1 FLNB Isoform 1 of Filamin-B 0.464 0.468
IPI00178352.5 FLNC Isoform 1 of Filamin-C 0.474 0.717
GT Pases IPI00005719.1 RAB1A Isoform 1 of Ras-related protein Rab-1A 0.583 0.527
IPI00016339.4 RAB5C Ras-related protein Rab-5C 0.583 0.427
IPI00020436.4 RAB11B Ras-related protein Rab-11B 0.599 0.648
IPI00007189.1 CDC42 Isoform 1 of Cell division control protein 42 homolog 0.629 0.805
IPI00010270.1 RAC2 Ras-related C3 botulinum toxin substrate 2 0.574 0.550
IPI00027434.1 RHOC Rho-related GTP-binding protein RhoC 0.646 0.694