TABLE 1.
No. | Target gene | Left probe oligonucleotide | Right probe oligonucleotide | Product size (nt)a |
---|---|---|---|---|
1 | tetO | CAGATACAATGAATTTGGAGCGTCAAAGG | GGAATCACTATCCAGACAGCAGTGACATC | 124 |
2 | virB8 | GTAAAGGTAGAACAAGCAGGAATGGATATGAG | AGCCGATGAGAATTTATTAAAATCAATTCTCGCAGGCT | 142 |
3 | cgtA | CTTTGGATAGCAGGCAATATACTTTCAAGAGAA | GCTTTTAAGGTAATAACTTCATTTTTTACTCGTATAAAAGCCC | 160 |
4 | Cj1136 | GTTTTTTGCCTCTTTAGCATTTTCTCCAAAAA | ATTCATACAAGTCTTTAAAATACTCTGACACATTTGCC | 178 |
5 | panB | GATCGTGACGCTATCTTAAATGCCTCAAG | ATTTATCAAAGAAAGCCACGCAAATGGGGTAAAAGTGGAAG | 196 |
6 | maf5 | CAGCCAGTTCATAAGCCATATGAGATACACTCATG | CCTGCGTTAATATATCCATAATCGTCTAGCCC | 214 |
7 | Cj1135 | CGCTTTCATTTTTATTTAAAATTACTCTTGAACCTTGTAAAATTACTTTG | CGTTTTGCAAATTCTAAATGATTTTTTACAAAGTCTTTTTCTAAAATCATATC | 232 |
8 | Cj0265 | GGATTTACATAACCATCAATTTTTAGCAAAACCCTGTTA | TTTTCGCTTTTTAATACTTCAAAAGGATTTGTAGGTAAAAGTC | 250 |
9 | CJE1733 | CTTTATGTCTTATTTTGATGATGTATCCGCCTTTG | GCTAAGGTTGATTATGCAAAGCTTTCAAAGGT | 268 |
10 | Cj0122 | CTAAGCTCTTTTAATAGATATTTTGGAAACAATCCTTTGCAA | ACACTTACCAAAATAAGAGATGAAAGTATTGAAAATGGAAATC | 286 |
11 | gmhA2 | GTTAATATGCTAGTATCTGTAGTAAGTGCAATACTTGCGATA | CCGGGTCTATCAAAATAAAACCTACTTACAAATTCCC | 311 |
12 | flgE2 | GTTCTTCTTTGTGGACAGCTACAAATATTACATTTACAC | CACAACCTCCTCAAGCAGCTACGAATGT | 338 |
13 | CJE1500 | GTTTTGATGATGGTCTAAAAGATCATTACGATTTCG | TTTTCCCTAAACTCTTAGAGCATAAAATTTTTGGATTATTTTTTATACC | 365 |
14 | Cj0423 | CTGGCTGATAATTTCTTTGCTAAATTTGTTTTTTGG | TTGGACTATTATTGTTTGGCTTGTTTGTTTAATATGGTCT | 391 |
15 | wlaN | CCACAATCATCTACTACAATGATTTCTATATCTTTAAAAGTTTGGTTA | ATGCAACTTTCTAATGCTCTAGCAATATATTTTTCCACAT | 418 |
16 | cfrA | CCAAAAAAGTAAGTGATAAATGGGAAACTTCTGTAAG | TTTGGATGCTCTTTTAAATGAAAATAAAGATTGGGGTAATACTT | 445 |
17 | Cj1321 | CATGTAATTTTATCACTTTTATACATCCTCAATCTTTTGTTTCA | AAAGAAGCTAAAATAGGACAAGGGGTTATAGTGTGTGT | 473 |
18 | Cj0008 | GAAAATAATGTCATAGAATGCCGTAAAAATAGTCCTGAAG | CGTTTGCTGTGTTATCTTTACTTTATCCAAATTTAGATTATAAAAATAATAATTTT | 503 |
SALSA PCR primers | FAM-GGGTTCCCTAAGGGTTGGA | GTGCCAGCAAGATCCAATCTAGA | NAb |
nt, nucleotides.
NA, not applicable. SALSA PCR primers are used to amplify all MLPA probes once the left and right probe oligonucleotides are ligated.