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. 2014 Nov;52(11):3863–3868. doi: 10.1128/JCM.01693-14

TABLE 1.

Scrapie isolates tested in mixes with BSE

Scrapie typea Genotypeb No. of isolatesc No. of BSE isolate spikesd No. of analysese
Classical ARQ/ARQ 4 6 8
VRQ/VRQ 6 6 12
ARQ/VRQ 6 6 12
AHQ/AHQ 2 4 4
AHQ/ARQ 4 6 8
AHQ/VRQ 3 5 6
ARH/ARH 4 6 8
ARH/ARQ 4 6 8
ARH/VRQ 4 6 8
ARR/VRQ 4 6 8
Atypical AHQ/ARQ 4 6 8
ARR/ARR 1 2 2
ARQ/ARQ 1 2 2
CH1641 AHQ/ARQ 3 5 6
Caprine scrapie ARQ/ARQ 4 2 8
Total 54 108
a

Scrapie isolates that were used in this study are listed as either classical, atypical, or CH1641 (all ovine) or caprine scrapie.

b

PRNP genotype of the scrapie isolate at codon positions 136, 154, and 171.

c

The number of scrapie isolates of each individual genotype.

d

The number of independent isolates of either ovine or caprine BSE that were spiked into scrapie samples of that particular genotype. Each scrapie isolate was spiked with 2 distinct BSE samples. In total, 6 ovine BSE isolates were used (4 of the ARQ/ARQ genotype, 2 of the AHQ/AHQ genotype), and 2 caprine BSE isolates were used (ARQ/ARQ genotype).

e

The number of individual sample mixes for each genotype that were prepared and analyzed. Total number of BSE/scrapie mixes analyzed was 108; in addition, 108 samples consisting of just the scrapie samples alone were tested.