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. 2014 Nov;52(11):3906–3912. doi: 10.1128/JCM.01877-14

TABLE 2.

Atypical LSPA-6 alleles confirmed by sequencing

Target Sequenced in isolate: Allele no. Size of EDL933 (bp) Size change (bp) Sequence difference Full isolate profile
Z5935 T234/00 6 133 +27 +2× TACCTGGAA +1× CACCTGGAA 262123
Z5935 E256/10 7 133 −9 −1× TACCTGGAA 273111
Z5935 E14/11 4 133 +18 +2× CACCTGGAA 242123
yhcG T458/00 3 394 −2 Deletion CACC(AT)TGCC 223323
yhcG T171/00 3 394 −2 Deletion CACC(AT)TGCC 213111
yhcG E280/11 4 394 −1 Deletion CACCA(T)TGCC 224311
yhcG E322/11 4 394 −1 Deletion CACCA(T)TGCC 214311
rtcB 08-BKT055439 3 270 +18 +2× TGGGAACGC 222133