Table 1. Cattle samples positive for influenza D virus genome by real-time reverse transcription PCR, France*.
| Sample ID | Collection date | Sample type | Age | Antimicrobial treatment | Vaccination† | Duration of respiratory signs | FluD (CT) | BRSV | BPIV-3 | Pasteurella multocida | Mannheimia haemolytica | Mycoplasma bovis | Histophilus somni | BCoV | BoHV-1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5731 | 2014 Jan 25 | Lung | Adult | Yes | NC | NC | P (35) | N | N | WP | WP | N | P | NT | P |
| 5831 | 2014 Feb 5 | Lung | 12 mo | Yes | Yes | 3–4 wk | P (31) | N | N | N | N | N | N | NT | NT |
| 5920 | 2014 Feb 18 | Lung | 1 mo | Yes | Yes | 3 d | P (27) | N | N | N | N | N | N | N | NT |
| 6106 | 2014 Mar 14 | Lung | 1 mo | No | Yes | 1 d | P (35) | N | N | WP | N | N | WP | N | NT |
| 2364 | 2011 Mar 30 | Lung | NC | NC | NC | NC | P (35) | NT | NT | P | N | N | N | NT | NT |
| 2986 | 2012 Jan 17 | Nasal swab | NC | NC | NC | NC | P (15) | P | N | WP | WP | N | N | NT | NT |
*Ct, cycle threshold; BCoV, bovine coronavirus; BoHV-1, bovine herpesvirus I; BPIV3, bovine parainfluenzavirus 3; BRSV, bovine respiratory syncytial virus; FluD, influenza D virus; ID, identification; N, negative; NC, not communicated; NT, not tested; P: positive (Ct<35), WP: weakly positive (35<Ct<40). †Against BRSV and BPIV-3.