Table 4.
List of all enriched GO terms obtained by applying enrichment analysis tool FuncAssociate (Berriz et al., 2003) on the set of highly targeted Arabidopsis proteins (i.e., Arabidopsis proteins predicted to interact with at least 3 Salmonella effectors).
| GO term | Description |
|---|---|
| GO:0003676 | Nucleic acid binding |
| GO:0003677 | DNA binding |
| GO:0003700 | Sequence-specific DNA binding TF activity |
| GO:0003723 | RNA binding |
| GO:0003735 | Structural constituent of ribosome |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity |
| GO:0003779 | Actin binding |
| GO:0003899 | DNA-directed RNA polymerase activity |
| GO:0004298 | Threonine-type endopeptidase activity |
| GO:0004693 | Cyclin-dependent protein serine/threonine kinase activity |
| GO:0004842 | Ubiquitin-protein transferase activity |
| GO:0004871 | Signal transducer activity |
| GO:0005484 | SNAP receptor activity |
| GO:0005507 | Copper ion binding |
| GO:0005509 | Calcium ion binding |
| GO:0005515 | Protein binding |
| GO:0005525 | GTP binding |
| GO:0005576 | Extracellular region |
| GO:0005622 | Intracellular region |
| GO:0005634 | Nuclear envelope |
| GO:0005839 | Proteasome core complex |
| GO:0005840 | Ribosome |
| GO:0006351 | Transcription, DNA-templated |
| GO:0006355 | Regulation of transcription, DNA-templated |
| GO:0006412 | Translation |
| GO:0006413 | Translational initiation |
| GO:0006457 | Protein folding |
| GO:0006511 | Ubiquitin-dependent protein catabolic process |
| GO:0007264 | Small GTPase mediated signal transduction |
| GO:0007267 | Cell-cell signaling |
| GO:0008233 | Peptidase activity |
| GO:0008270 | Zinc ion binding |
| GO:0008794 | Arsenate reductase (glutaredoxin) activity |
| GO:0009408 | Response to heat |
| GO:0009409 | Response to cold |
| GO:0009414 | Response to water deprivation |
| GO:0009570 | Chloroplast stroma |
| GO:0009579 | Thylakoid |
| GO:0009651 | Response to salt stress |
| GO:0009733 | Response to auxin |
| GO:0009737 | Response to abscisic acid |
| GO:0009739 | Response to gibberellin |
| GO:0009751 | Response to salicylic acid |
| GO:0009753 | Response to jasmonic acid |
| GO:0009828 | Plant-type cell wall loosening |
| GO:0009873 | Ethylene mediated signaling pathway |
| GO:0010200 | Response to chitin |
| GO:0015031 | Protein transport |
| GO:0015035 | Protein disulfide oxidoreductase activity |
| GO:0016491 | Oxidoreductase activity |
| GO:0016607 | Nuclear speck |
| GO:0016762 | Xyloglucan:xyloglucosyl transferase activity |
| GO:0022626 | Cytosolic ribosome |
| GO:0022627 | Cytosolic small ribosomal subunit |
| GO:0042254 | Ribosome biogenesis |
| GO:0042742 | Defense response to bacterium |
| GO:0043565 | Sequence-specific DNA binding |
| GO:0045454 | Cell redox homeostasis |
| GO:0045892 | Negative regulation of transcription, DNA-templated |
| GO:0045893 | Positive regulation of transcription, DNA-templated |
| GO:0046686 | Response to cadmium ion |
| GO:0046872 | Metal ion binding |
| GO:0051726 | Regulation of cell cycle |
The shown terms had a p-value less than 0.001.