Table 2.
SNP effect type | Effects parameters SNP q | Genotype value | Locus effect architecture | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Additive | Dominance | A | B | C | D | E | F | G | ||||
Additive | βq | 0 | 0 | βq | 2βq | 1 | - | - | - | - | 0.6 | 0.3 |
Minor allele dominant | βq | βq | 0 | 2βq | 2βq | - | 1 | - | - | - | - | - |
Major allele dominant | βq | −βq | 0 | 0 | 2βq | - | - | 1 | - | - | - | - |
Heterosis | 0 | βq | 0 | βq | 0 | - | - | - | 1 | - | 0.1 | 0.1 |
General dominance | βq | δβq | 0 | (1 + δ)βq | 2βq | - | - | - | - | 1 | 0.3 | 0.6 |