Skip to main content
. 2015 Feb 3;10(2):e0117559. doi: 10.1371/journal.pone.0117559

Table 1. Important gene fragments and their significant similarity; U- Upregulated, D- Downregulated.

TDF No. Accession Length U/D Annotation (BlastX), Organism E- value
Signal transduction
1. GU011970 309 D Zinc finger protein, putative [Ricinus communis] 6e-44
2. FJ581437 541 D Receptor kinase, putative [Ricinus communis] 6e-99
3. GU320766 120 U DNA-binding SAP; Zinc finger, MIZ-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] 2e-07
4. GQ922055 358 U Serine/threonine-protein kinase PBS1, putative [Ricinus communis] 7e-58
5. GU592825 231 U Protein kinase (PK) [Fagus sylvatica] 2e-23
6. GU592827 420 D DNAJ heat shock N-terminal domain-containing protein [A. thaliana] 1e-68
7. GU133626 243 U Chaperone protein DnaJ-like [Glycine max] 6e-06
8. GU326970 126 U F-box family protein [Populus trichocarpa] 6e-06
9. GU062406 213 U Sister chromatid cohesion 1 protein, putative [Ricinus communis] 1e-18
Defence
10. EU935215 104 U Cystatin [Spinacia oleracea] 9e-20
11. GQ922057 351 U SGT1–2 [Glycine max] 6e-53
12. GQ922059 429 U Heat shock 70 kDa protein, mitochondrial-like [Glycine max] 6e-89
13. GU592820 351 U CC-NB-LRR type disease resistance protein Rps1-k-2 [Glycine max] 4e-34
14. GQ466607 666 U Thaumatin-like protein 1a-like [Glycine max] 7e-93
15. JN160607 240 U Vacuolar-processing enzyme-like [Glycine max] 9e-41
16. FJ581436 298 U rac GTPase activating protein 1 [Lotus japonicus] 2e-24
17. GU785018 285 U NADPH oxidoreductase/15- Hydroxyprostaglandin dehydrogenase [Medicago truncatula] 1e-47
Metabolism
18. GU223572 408 U Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis] 1e-57
19. GU223575 201 U Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis] 6e-11
20. GU223576 142 U Similar to beta-glucosidases [Arabidopsis thaliana] 1e-11
21. GU011969 440 D Ribonucleoprotein, chloroplast, putative [Ricinus communis] 2e-52
22. GU223577 288 D Nucleotide binding protein, putative [Ricinus communis] 3e-52
23. GU011971 150 U Sedoheptulose-bisphosphatase precursor [Arabidopsis thaliana] 2e-28
24. GU223578 310 U Exostosin-like [Medicago truncatula] 3e-27
25. EU935216 362 U Adenosine 5′-phosphosulfate reductase [Glycine max] 4e-74
26. GU320767 115 U Putative beta-galactosidase [Glycine max] 5e-15
27. GU320768 246 U Putative mutator sub-class protein [Arachis hypogaea] 8e-17
28. FJ231268 206 U Methionine synthase [Glycine max] 2e-32
29. GU320771 669 D Amine oxidase, putative [Ricinus communis] 6e-148
30. FJ621571 498 D Similar to cysteine protease Cp5 [Vitis vinifera] 1e-61
31. FJ621572 426 D Polygalacturonase precursor [Glycine max] 5e-63
32. GU326969 261 D Endo beta n-acetylglucosaminidase, putative [Ricinus communis] 6e-12
33. GU326971 300 U Polyprotein [Sorghum bicolor] 1e-18
34. GU326972 213 U Retrotransposon gag protein [Arachis hypogaea] 8e-29
35. GQ922058 432 U Dihydroflavonol-4-reductase [Medicago truncatula] 8e-62
36. GU473169 288 U Probable NADH dehydrogenase-like[Glycine max] 2e-29
37. GU473170 267 D Cellulose synthase catalytic subunit [Gossypium hirsutum] 3e-57
38. GU473171 315 U Microtubule-associated protein, putative [Ricinus communis] 1e-27
39. GU576547 552 U GIGANTEA [Glycine max] 2e-99
40. GU576549 285 U Peroxisomal fatty acid beta-oxidation multifunctional protein [Glycine max] 9e-42
41. GU062405 240 U Glycine-rich protein [Arabidopsis thaliana] 5e-23
42. GU576554 150 U Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase [Pisum sativum] 1e-26
43. GU592818 198 U Phytochrome A1 [Glycine max] 1e-28
44. GQ979706 226 U Nucleic acid binding protein, putative [Ricinus communis] 4e-47
45. GU592826 633 D Granule-bound glycogen (starch) synthase [Astragalus membranaceus] 1e-123
46. GU785014 135 U N-alpha-acetyltransferase 35, NatC auxiliary subunit-like [Glycine max] 3e-15
47. GU785017 153 U Short-chain dehydrogenase/reductase [Medicago truncatula] 1e-16
48. FJ226754 338 U ATP-dependent Clp protease regulatory subunit CLPX [Arabidopsis thaliana] 3e-66
49. JZ356629 210 D UDP-glycosyltransferase 83A1-like [Glycine max] 1e-20
50. JZ356642 183 U WD repeat-containing protein 48-like [Glycine max] 3e-18
51. JZ356660 192 U Tyrosine decarboxylase [Medicago truncatula] 9e-08
52. GU326968 255 U Gag-pol polyprotein [Phaseolus vulgaris] 9e-19
53. FJ231266 422 D Multicopper oxidase, putative [Ricinus communis] 7e-57
54. GU576550 168 U WD-repeat protein, putative [Ricinus communis] 4e-16
Photosynthesis
55. EU935214 355 U Oxygen-evolving complex-related [Arabidopsis thaliana] 2e-57
56. FJ226755 210 U Photosystem II type I chlorophyll a/b-binding protein[Glycine max] 2e-38
57. GQ979704 187 D Mg chelatase subunit (46 kD) [Glycine max] 1e-18
58. JZ356640 213 U Chloroplast magnesium chelatase I subunit [Pisum sativum] 3e-13
59. GQ922056 591 U Cytochrome P450 monooxygenase CYP97C10 [Glycine max] 2e-125
Transport
60. FJ231267 300 D Nodulin 26-like protein [Medicago truncatula] 1e-32
61. GQ293093 129 D AAA ATPase; ABC transporter, transmembrane region, type 1 [Medicago truncatula] 6e-08
62. GU062403 204 D Protein alx, putative [Ricinus communis] 2e-17
63. GU576551 132 U ATP/ADP transporter [Populus trichocarpa] 2e-34
64. GU062404 130 U Cytochrome c biogenesis [Medicago truncatula] 5e-17
65. GU592822 147 U Nucleobase ascorbate transporter [Populus trichocarpa] 4e-10
66. GQ466606 465 D Glutathione-regulated potassium-efflux system protein kefB, putative [Ricinus communis] 2e-63
Transcription
67. GU320773 207 D ATP-dependent RNA helicase eIF4A, putative [Phytophthora infestans T30–4] 5e-35
68. GU473167 237 U Squamosa promoter-binding protein, putative [Ricinus communis] 1e-19
69. GU062402 354 D Valine—tRNA ligase-like protein [Arabidopsis thaliana] 5e-67
70. GU320772 306 U U3 small nucleolar RNA (U3 snorna) associated protein [Ricinus communis] 3e-53
71. JZ356597 135 U tRNA dimethylallyltransferase 9-like [Glycine max] 8e-15
72. JZ356611 414 U RNA-directed DNA polymerase homolog [Arabidopsis thaliana] 3e-28
73. JZ356620 233 U Reverse transcriptase [Pisum sativum] 7e-18