Table 2.
BirA variants | Apparent rate kapp (s−1)b | Fold decreasec |
---|---|---|
Wild type | 0.136 ± 0.004 | — |
V214A | 0.0537 ± 0.0004 | 2.53 ± 0.03 |
V219Ad | 0.0064 ± 0.0003 | 21.25 ± 0.06 |
F124A | 0.0218 ± 0.0004 | 6.24 ± 0.03 |
P126A | 0.052 ± 0.001 | 2.62 ± 0.04 |
M211Ad | 0.0043 ± 0.0003 | 31.63 ± 0.08 |
V218A | 0.043 ± 0.001 | 3.16 ± 0.04 |
F124A/V218A | 0.0081 ± 0.0002 | 16.79 ± 0.04 |
F124A/M211Ad | 0.00072 ± 0.00002 | 188.88 ± 0.04 |
Measurements were performed in Standard Buffer at 20°C as described in Materials and Methods.
The apparent rates are the average of the best fit rates obtained from nonlinear least squares analysis of at least five (stopped-flow) or three (fluorimeter) traces with the standard error of the mean. Comparison of wild type with variant rates using the unpaired t-test yielded P values < 0.05. With the exception of those obtained for the wild-type protein, all transients were analyzed using the model that included a linear term for photobleaching along with the single exponential.
Fold decrease is the rate measured for wild-type BirA divided by that measured for the variant.
Measured using the fluorimeter.