. Author manuscript; available in PMC: 2016 Mar 1.

Published in final edited form as: Infect Genet Evol. 2015 Jan 3;30:225–229. doi: 10.1016/j.meegid.2014.12.034

Table 2.

Information on the single nucleotide polymorphisms genotyped for COL1A1, COL1A2 and MMP1 in the Brazilian population.

Gene/Marker	Location	Physical Position (Chr:bp)	Alleles^a	MAF^b	Caucasian	African
COL1A2_rs388625	Intron	7:94396612	A/G	0.48	0.48	0.42
COL1A2_rs11770203	Intron	7:94402145	G/T	0.26	0.33	0.18
MMP1_rs5854	3’UTR	11:102790143	A/G	0.25	0.35	0.19
MMP1_rs470747	Intron	11:102790864	A/G	0.34	0.35	0.35
MMP1_rs7125062	Intron	11:102792772	C/T	0.33	0.27	0.35
COL1A1_rs1061237	3’UTR	17:50185414	C/T	0.30	0.31	0.42
COL1A1_rs2586488	Intron	17:50188065	A/G	0.37	0.37	0.42
COL1A1_rs2075554	Intron	17:50196948	C/T	0.26	0.19	0.26

Major>minor alleles for this Brazilian population.

Minor allele frequencies (MAF) for this Brazilian population, and for Caucasian (CEU) and African (YRI) populations as indicated.