Table 2.
Sequencing, Assembly, and Annotation Statistics for Rickettsia felis Strains LSU and LSU-Lb
Source | Reads |
Contigs |
Scaffolded | Scaffolds | Final Consensus | %GC | ORFs | |||
---|---|---|---|---|---|---|---|---|---|---|
Used | Assembled | No. | Largest | N50 | ||||||
LSU | 3,036,844 | 2,725,860 | 10,578 | 45,231 | 688 | 7,827 | 22 | 1,546,910 | 32.82 | 1,970 |
chr | 6,576 | 21 | 1,483,097 | 32.4 | 1,859 | |||||
pRF | 1,251 | 1 | 63,813 | 33.24 | 111 | |||||
Wolbachia | 678 | 438 | 750,706 | 35.73 | NA | |||||
LSU-Lb | 5,463,632 | 2,612,084 | 59,374 | 53,712 | 413 | 5,266 | 44 | 1,579,225 | 33.15 | 1,691 |
chr | 2,404 | 35 | 1,467,654 | 32.35 | 1,576 | |||||
pRF | 2,861 | 8 | 59,272 | 33.76 | 72 | |||||
pLbaR | 1 | 1 | 52,299 | 33.35 | 43 |