Table 1.

Datasets used for the copy number (CN), gene expression (Exp) and microRNA expression (miR) downloaded from Gene Expression Omnibus (GEO).

Tumor type	GEO	Platform	Data	References
Breast	GSE22133	SWEGENE_BAC_33K_Full	CN	Jönsson et al., 2012
Melanoma	GSE45354	Agilent-021924 SurePrint G3 Human CGH Microarray 8 × 60 K	CN
Lung	GSE29065	SWEGENE_BAC_32K_Full	CN	Staaf et al., 2013
Wilms	GSE28397	Custom Agilent 2 × 105 K Human Genomic microarray	CN
Breast	GSE22820	Agilent-014850 Whole Human Genome Microarray 4x44K G4112F	Exp	Liu et al., 2011
Melanoma	GSE46517	Affy metrix U133A microarray chip	Exp	Kabbarah et al., 2010
Lung	GSE19804	Affy metrix Human Genome U133 Plus 2.0 Array	Exp	Lu et al., 2010
Wilms	GSE4530	Homo sapiens 4.8K 02-01 amplified cDN A	Exp
Breast	GSE48088	[miRNA-2_0] Affy metrix Multispecies miRNA-2_0 Array	miR	Peña-Chilet et al., 2014
Melanoma	GSE35579	CRUK/Melton lab-Human melanoma-71 -v2 -microRN A expression	miR	Xu et al., 2012
Lung	GSE51855	Agilent-015508 Human miRNA Microarray	miR	Arima et al., 2014
Wilms	GSE38419	Febit Homo Sapiens miRBase 13.0	miR	Schmitt et al., 2012