Table 2.
Pharmacogenes and Variants in Pediatric Cardiac Transplantation
Gene Name(s) | Protein Names | Cellular Functions | Pharmaco-variants | Alternate Variant Name(s) | Associations | MAF in EA* | MAF in AA† |
---|---|---|---|---|---|---|---|
ABCB1 MDR1 P-gp |
ATP-binding cassette, sub-family B, member 1 | Membrane efflux pump and drug transporter | rs1045642 | C3435T Ile1145Ile |
CC homozygotes on tacrolimus with increased steroid dependency, lower tacrolimus concentration10–12 | 0.571 | 0.205 |
rs2032582 | G2677C/T Ser893Ala/T hr |
GG homozygotes with lower tacrolimus concentration11 | 0.469 | 0.105 | |||
ABCC2 DJS MRP2 cMRP |
ATP-binding cassette, sub-family C, member 2 | Membrane efflux pump and drug transporter | rs717620 | −24C>T | CC homozygotes on MMF/MPA with lower discontinuation, less GI intolerance13 | 0.181 | 0.035 |
CYP3A4 | Cytochrome P450, family 3, subfamily A, polypeptide 4 | Steroid hormone and drug metabolism | rs35599367 | CYP3A4*22 | *22 carriers with lower tacrolimus doses to reach target concentration14 | NR | NR |
CYP3A5 | Cytochrome P450, family 3, subfamily A, polypeptide 5 | Steroid hormone and drug metabolism | rs776746 | CYP3A5*3 | *3 homozygotes with higher tacrolimus concentration, lower tacrolimus dose requirement, higher tacrolimus dose- adjusted concentration11,15 | 0.036 | 0.64 |
IMPDH1 | Inosine 5′-monophosphate dehydrogenase 1 | Guanine nucleotide synthesis | rs2278294 | 250-106G>A | GG homozygotes on MMF/MPA with reduced dose-holding or discontinuation, less GI intolerance13 | 0.323 | 0.377 |
rs2228075 | 1245G>A/C Ala492Ala |
GG homozygotes on MMF/MPA with less GI intolerance13 | 0.248 | 0.202 | |||
IMPDH2 | Inosine 5′-monophosphate dehydrogenase 2 | Guanine nucleotide synthesis | rs11706052 | 819+10T>C | C carriers on MMF/MPA with possible increased bone marrow toxicity13 | 0.115 | 0.018 |
Based on HapMap CEU Population
Based on HapMap ASW Population
NR – Not reported in HapMap Data; MAF – Minor Allele Frequency; EA – European-Americans; AA – African-American; MMF – mycophenolate mofetil; MPA – mycophenolic acid