Table 1.
Sample | R 2 | Log2 dynamic range (FPKM) | Sample | R 2 | Log2 dynamic range (FPKM) | Sample | R 2 | Log2 dynamic range (FPKM) |
---|---|---|---|---|---|---|---|---|
C1 | 0.93 | 13.74 | LG1 | 0.92 | 14.36 | LR1 | 0.93 | 14.91 |
C2 | 0.91 | 14.52 | LG2 | 0.91 | 14.52 | LR2 | 0.91 | 14.64 |
C3 | 0.92 | 14.54 | LG3 | 0.91 | 15.16 | LR3 | 0.92 | 13.71 |
C4 | 0.94 | 15.61 | LG4 | 0.91 | 15.32 | LR4 | 0.93 | 13.32 |
C5 | 0.94 | 14.21 | LG5 | 0.92 | 13.92 | LR5 | 0.91 | 14.53 |
C6 | 0.94 | 14.29 | LG6 | 0.90 | 14.49 | LR6 | 0.93 | 16.05 |
C7 | 0.92 | 13.88 | HG1 | 0.90 | 14.18 | MR1 | 0.91 | 14.00 |
C8 | 0.92 | 13.83 | HG2 | 0.91 | 15.26 | MR2 | 0.93 | 13.97 |
C9 | 0.89 | 14.11 | HG3 | 0.93 | 15.51 | MR3 | 0.91 | 15.60 |
C10 | 0.92 | 14.28 | HG4 | 0.90 | 14.99 | MR4 | 0.92 | 14.07 |
C11 | 0.91 | 16.19 | HG5 | 0.90 | 14.92 | MR5 | 0.93 | 13.86 |
C12 | 0.93 | 15.26 | HG6 | 0.93 | 14.76 | MR6 | 0.92 | 15.70 |
HR1 | 0.91 | 16.08 | ||||||
HR2 | 0.90 | 13.95 | ||||||
HR3 | 0.92 | 14.08 | ||||||
HR4 | 0.91 | 14.08 | ||||||
HR5 | 0.93 | 15.75 | ||||||
HR6 | 0.92 | 15.19 |
1. R2 values represent the correlation between measured FPKM values and expected concentrations of control transcripts.
2. Dynamic range was calculated from maximum-minimum FPKM values of control transcripts for all individual libraries, using only control transcripts that had ≥1 mapped read in ≥6 replicate samples.