Figure 5. TF-level views of the simulated and actual expression pattern transitions in the transcriptional network.

(a) Simulated expression patterns of the 0^th to 5^th states after supplying the step functions, 0 → 1 to class B₁ and 1 → 0 to class B₂, which modelled the external input by PMA. In these images the averaged expression levels between the two trajectories (from α₉ to α₆ and from α₁₀ to α₇ (Fig. 4)) are displayed. (b) Actual expression patterns 0 to 96 hours after starting PMA treatment. The coloured bar on the right hand side indicates the expression level of the TFs in both panels.