Table 2. Properties of all SNPs in DDR2 tested in this study.
No. | SNP | Physical position | Genic position | Allele 1 | Allele 2 | MAF |
---|---|---|---|---|---|---|
1 | rs4518873 | 162603729 | Intron1 | C | T | 0.372 |
2 | rs6671267 | 162608768 | Intron1 | G | A | 0.095 |
3 | rs10917577 | 162613975 | Intron1 | A | G | 0.385 |
4 | rs10799854 | 162619828 | Intron1 | C | T | 0.113 |
5 | rs3795641 | 162625020 | Exon2 | G | A | 0.113 |
6 | rs10799858 | 162630279 | Intron2 | G | A | 0.175 |
7 | rs12044481 | 162635875 | Intron2 | A | G | 0.261 |
8 | rs4657221 | 162642183 | Intron2 | G | A | 0.168 |
9 | rs7521233 | 162649471 | Intron2 | C | T | 0.266 |
10 | rs4657226 | 162653274 | Intron2 | G | A | 0.388 |
11 | rs6697469 | 162658773 | Intron2 | C | G | 0.253 |
12 | rs7553831 | 162661011 | Intron2 | T | G | 0.264 |
13 | rs10737487 | 162667331 | Intron2 | G | A | 0.407 |
14 | rs3923572 | 162671589 | Intron2 | T | C | 0.237 |
15 | rs10917588 | 162676191 | Intron2 | C | T | 0.398 |
16 | rs4559477 | 162681151 | Intron2 | T | G | 0.365 |
17 | rs16843872 | 162686362 | Intron2 | G | A | 0.129 |
18 | rs1039873 | 162692668 | Intron3 | C | G | 0.226 |
19 | rs2805034 | 162699597 | Intron3 | A | G | 0.229 |
20 | rs1510310 | 162703160 | Intron3 | C | G | 0.232 |
21 | rs2806423 | 162711989 | Intron3 | T | A | 0.247 |
22 | rs2684865 | 162721688 | Intron3 | T | C | 0.222 |
23 | rs2684866 | 162726281 | Intron7 | A | C | 0.412 |
24 | rs10799870 | 162733123 | Intron9 | T | C | 0.173 |
25 | rs2298258 | 162737116 | Exon11 | G | C | 0.389 |
26 | rs3738807 | 162741794 | Intron12 | T | C | 0.227 |
27 | rs1780007 | 162748025 | Intron16 | A | C | 0.420 |
28 | rs1779999 | 162753092 | 3’UTR | C | T | 0.418 |
Note: MAF, minor allele frequency for allele A1 in the Chinese BMD sample.