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. 2015 Feb 6;10(2):e0117617. doi: 10.1371/journal.pone.0117617

Table 1. Clinical identity, identification technique, and source of all the clinical isolates used in this study.

Clinical Identity Identification Technique Number of Isolates Source
Acinetobacter baumannii culture-based 20 Clinical Microbiology Laboratory-UCSF, CA
Bordetella pertussis culture-based 20 Microbial Diseases Laboratory-California Public Health Department, CA
Burkholderia ambifaria recA-RFLP; box-PCR fingerprinting 2 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Burkholderia cenocepacia recA-RFLP; box-PCR fingerprinting 6 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Burkholderia cepacia recA-RFLP; box-PCR fingerprinting 7 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Burkholderia dolosa recA-RFLP; box-PCR fingerprinting 3 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Burkholderia multivorans recA-RFLP; box-PCR fingerprinting 3 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Burkholderia pyrrocinia recA-RFLP; box-PCR fingerprinting 3 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Burkholderia stabilis recA-RFLP; box-PCR fingerprinting 2 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Burkholderia vietnamiensis recA-RFLP; box-PCR fingerprinting 4 B. cepacia Research Laboratory and Repository-University of Michigan, MI
Citrobacter freundii culture-based 20 Clinical Microbiology Laboratory-UCSF, CA
Enterobacter aerogenes culture-based 20 Clinical Microbiology Laboratory-UCSF, CA
Enterobacter cloacae complex culture-based 29 Clinical Microbiology Laboratory-UCSF, CA
Escherichia coli culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Enterococcus faecalis culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Enterococcus faecium culture-based 31 Clinical Microbiology Laboratory-UCSF, CA
Haemophilus influenzae culture-based 37 Clinical Microbiology Laboratory-UCSF, CA
Klebsiella oxytoca culture-based 20 Clinical Microbiology Laboratory-UCSF, CA
Klebsiella pneumoniae culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Mycobacterium tuberculosis nucleic acid hybridization 29 MTB Research Laboratory-UCSF, CA
Neisseria lactamica serotyping; porA PCR 2 Clinical Microbiology Laboratory-UCSF, CA
Neisseria meningitidis serotyping; porA PCR 28 Institute of Environmental Science and Research-Wellington, New Zealand
Proteus mirabilis culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Pseudomonas aeruginosa culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Serratia marcescens culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Staphylococcus aureus culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Staphylococcus epidermidis culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Stenotrophomonas maltophilia culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Streptococcus pneumoniae culture-based 30 Clinical Microbiology Laboratory-UCSF, CA
Streptococcus viridans group culture-based 31 Clinical Microbiology Laboratory-UCSF, CA