Table 1.

Demographics of HD and control brains

HD ID	Death	Onset	Duration	CAG repeat size	PMI (h)	Striatal score	Control ID	Death	PMI (h)
(A) Brain samples analyzed for FACS-ChIP-sequencing
HD-1	55	44	11	45	37	2.66	C-1	55	40
HD-2	56	40	16	45	19	2.66	C-2	56	17
HD-3	71	52	19	43	21	2.43	C-3	71	24
HD-4	69	50	19	42	19	2.48	C-4	69	18
HD-5	43	28	15	49	21	2.70	C-5	43	12
HD-6	68	45	23	42	4	2.67
(B) Brain samples analyzed for DNA methylation
HD-2	56	40	16	45	19	2.66	C-7	66	19
HD-3	71	52	19	43	21	2.43	C-8	69	15
HD-4	69	50	19	42	19	2.48	C-9	54	24
HD-5	43	28	15	49	21	2.70	C-10	61	10
HD-6	68	45	23	42	4	2.67	C-12	44	28
HD-7	89	70	19	40	57	3.33	C-13	53	24
HD-8	69	63	6	41	6	2.64	C-14	—	—
HD-9	67	40	27	44	14	3.33	C-15	57	20
HD-10	61	35	26	46	25	3.58	C-16	43	15
HD-11	63	40	23	45	21	2.74	C-17	52	23
HD-12	62	40	22	45	28	3.58	C-18	58	20
HD-13	76	58	18	41	7	—	C-19	70	21
HD-14	48	25	23	48	19	3.82	C-20	46	30
HD-15	40	34	6	51	—	3.52	C-21	66	17
HD-16	55	31	24	47	24	—	C-23	36	21
HD-17	72	55	17	41	8	2.59	C-24	60	24
HD-18	67	48	19	43	22	2.74	C-25	54	24
HD-19	59	35	24	46	6	2.62	C-27	61	17
HD-20	72	55	17	42	12	2.74	C-28	62	18
HD-21	78	62	16	42	18	—	C-29	55	26
HD-22	68	52	16	42	13	2.66	C-30	52	18
HD-23	57	40	17	49	25	2.91	C-31	69	26
HD-24	53	40	13	48	23	3.60	C-32	61	25
HD-25	48	38	10	45	11	3.60	C-33	64	19
HD-26	36	24	12	54	21	2.91	C-34	88	11
							C-35	71	40
							C-36	68	25
(C) Brain samples analyzed for qPCR analysis of mRNA
HD-2	56	40	16	45	19	2.66	C-10	61	10
HD-3	71	52	19	43	21	2.43	C-11	68	19
HD-4	69	50	19	42	19	2.48	C-12	44	28
HD-5	43	28	15	49	21	2.7	C-13	53	24
HD-6	68	45	23	42	4	2.67	C-15	57	20
HD-8	69	63	6	41	6	2.64	C-18	58	20
HD-16	55	31	24	47	24	—	C-19	70	21
HD-17	72	55	17	41	8	2.59	C-22	73	19
HD-19	59	35	24	46	6	2.62	C-24	60	24
HD-21	78	62	16	42	18	—	C-26	76	26
HD-22	68	52	16	42	13	2.66	C-28	62	18
HD-24	53	40	13	48	23	3.6	C-31	69	26
HD-25	48	38	10	45	11	3.6	C-34	88	11
HD-26	36	24	12	54	21	2.91	C-37	93	13