Table 1.
Probe sets on chromosome 1 between 25.3Mb and 30.6Mb that show ≥2-fold differential expression between Cvi and Ler at the 95% confidence level
| Probe set ID | Locus ID | Ler over Cvi fold change | Log2 expression level | Description | |
|---|---|---|---|---|---|
| Ler | Cvi | ||||
| 260097_at | AT1G73220 | 72.7 down | 3.7 | 9.9 | Organic cation transporter (OCT1) |
| 264100_at | AT1G78970 | 48.5 down | 1.9 | 7.5 | Lupeol synthase (LUP1) |
| 245215_at | AT1G67830 | 6.0 down | 5.9 | 8.5 | α-Fucosidase (FXG1) |
| 245736_at | AT1G73330 | 5.1 down | 10.9 | 13.3 | Protease inhibitor (DR4) |
| 259941_s_at | AT1G71280 | 4.4 down | 5.2 | 7.4 | DEAD/DEAH box helicase |
| 260806_at | AT1G78260 | 2.9 down | 9.4 | 11.0 | RNA-binding protein |
| 260401_at | AT1G69840 | 2.5 down | 8.9 | 10.2 | Unknown protein |
| 264144_at | AT1G79320 | 2.2 down | 7.4 | 8.5 | Metacaspase (MC6) |
| 259705_at | AT1G77450 | 2.0 up | 12.1 | 11.1 | NAC transcription factor (NAC032) |
| 259977_at | AT1G76590 | 3.1 up | 8.3 | 6.7 | Zinc-binding protein |
| 261901_at | AT1G80920 | 3.4 up | 12.4 | 10.6 | DNA-J protein (J8) |
| 260411_at | AT1G69890 | 3.4 up | 7.6 | 5.9 | Unknown protein |
| 264957_at | AT1G77000 | 3.7 up | 10.1 | 8.2 | F-box protein (SKP2B) |
| 262362_at | AT1G72840 | 4.0 up | 7.4 | 5.4 | ATP-binding transmembrane receptor |
| 260207_at | AT1G70730 | 4.7 up | 10.8 | 8.6 | Phosphoglucomutase |
| 245731_at | AT1G73500 | 8.9 up | 10.1 | 6.9 | MAP kinase kinase (MKK9) |
| 260101_at | AT1G73260 | 12.2 up | 12.6 | 9.0 | Trypsin protease inhibitor |
| 259866_at | AT1G76640 | 14.3 up | 7.4 | 3.6 | Calmodulin-related protein |
| 264720_at | AT1G70080 | 20.8 up | 10.3 | 5.9 | Terpene synthase |
Abbreviations: NIL, near isogenic line; OCT, organic cation transporter; RIL, recombinant inbred line.