Table 4.
Number of genes associated with general COG functional categories
| Code | Value | % age a | Description |
|---|---|---|---|
| A |
0 |
0 |
RNA processing and modification |
| J |
160 |
3.32 |
Translation, ribosomal structure and biogenesis |
| K |
246 |
5.11 |
Transcription |
| L |
185 |
3.85 |
Replication, recombination and repair |
| B |
1 |
0.02 |
Chromatin structure and dynamics |
| D |
34 |
0.70 |
Cell cycle control, Cell division, chromosome partitioning |
| V |
45 |
0.94 |
Defense mechanisms |
| T |
207 |
4.30 |
Signal transduction mechanisms |
| M |
123 |
2.56 |
Cell wall/membrane biogenesis |
| N |
77 |
1.60 |
Cell motility |
| U |
50 |
1.04 |
Intracellular trafficking and secretion |
| O |
106 |
2.20 |
Posttranslational modification, protein turnover, chaperones |
| C |
216 |
4.49 |
Energy production and conversion |
| G |
136 |
2.83 |
Carbohydrate transport and metabolism |
| E |
299 |
6.22 |
Amino acid transport and metabolism |
| F |
67 |
1.39 |
Nucleotide transport and metabolism |
| H |
144 |
2.99 |
Coenzyme transport and metabolism |
| I |
135 |
2.81 |
Lipid transport and metabolism |
| P |
173 |
3.60 |
Inorganic ion transport and metabolism |
| Q |
81 |
1.68 |
Secondary metabolites biosynthesis, transport and catabolism |
| R |
350 |
7.28 |
General function prediction only |
| S |
291 |
6.05 |
Function unknown |
| - | 2,177 | 45.27 | Not in COGs |
a)The total is based on the total number of protein coding genes in the annotated genome.