Table 1. Variants detected by whole genome re-sequencing of an affected Eurasier.
Filtering step | Number of variants |
---|---|
Variants in the whole genome a | 3,412,492 |
Variants in the critical 3.4 Mb interval on chromosome 1 | 6,649 |
Variants in the critical interval that were absent from 47 other dog genomes | 150 |
Non-synonymous variants in the whole genome a | 14,211 |
Non-synonymous variants in the critical 3.4 Mb interval on chromosome 1 | 20 |
Non-synonymous variants in the critical interval that were absent from 47 other dog genomes | 4 |
a The sequences were compared to the reference genome (CanFam 3) from a Boxer. Only homozygous variants are reported.