Table 5.
QTL region in B. oleracea | Genes in B. oleracea (Parkin et al. 2014 [ 14 ]) | Orthologs in B. rapa | Syntenic genes in A. thaliana | |
---|---|---|---|---|
Gene ID b | Position in B. rapa | |||
BRQTL-C1_1 | Bo1g056920 | Bra034079 | A01: 25,091,903 - 25,095,843 | |
C01: 14,884,502 - 16,579,946 | ||||
BRQTL-C1_2 | Bo1g057060/070 | Bra039560 | A01: 11,678,267 - 11,687,802 | AT4G14380 |
C01: 18,227,386 – 37,119,290 | ||||
Bo1g086130 | Bra013691 | A01: 7,172,559 - 7,175,366 | AT4G23440 | |
Bo1g087610 | Bra038144 | Scaffold000140 | AT1G57850 | |
Bo1g091560 | ||||
Bo1g094680/710 a | Bra031456/455 a | A01: 17,128,737 – 17,140,522 | AT1G61100/105 a | |
Bo1g103860 | ||||
BRQTL-C3 | Bo3g060060/070/080/100/110/130/140 a | Bra001160/161/162 a | A03: 15,040,407 - 15,054,981 | |
C03: 19,714,632 - 22,846,644 | ||||
BRQTL-C6 | Bo6g025490 | Bra004192 | A07: 20,618,348 - 20,627,341 | AT1G66840 |
C06: 7,423,787 - 10,466,894 | Bo6g031330/350/360/380 | Bra003997 | A07: 19,462,054 - 19,467,133 | AT1G69550 |
aTandemly arrayed genes.
bGene ID in BRAD database (http://brassicadb.org/).