Table 3.
Mean sequence richness, evenness, and diversity in lesion and HMP samples
Cysts | Nodules | Polyps | Reinke’s edema | Saliva | Throat | |
---|---|---|---|---|---|---|
Chao | 96.9 ± 23.4b | 121.7 ± 43.5 | 98.1 ± 15.6c | 90.2 ± 11.6a | 190.1 ± 12.2abc | 140.6 ± 11.5 |
1/Simpson | 7.4 ± 2.9 | 6.0 ± 2.8 | 4.0 ± 1.3e | 4.1 ± 1.5d | 17.7 ± 1.6* | 11.0 ± 1.4de |
Shannon | 1.9 ± 0.5 | 1.8 ± 0.6 | 1.3 ± 0.3g | 1.3 ± 0.3f | 3.4 ± 0.1** | 2.8 ± 0.1fg |
Good’s coverage | 0.991 ± 0.002 | 0.997 ± 0.001 | 0.994 ± 0.001 | 0.993 ± 0.001 | 0.988 ± 0.001 | 0.992 ± 0.001 |
Mean Good’s coverage, Chao, inverse Simpson, and Shannon are reported for each of the four lesion types, and saliva and throat samples from the HMP, along with standard error.
*Saliva was significantly different from all other groups for inverse Simpson (p < 0.0001).
**Saliva was significantly different from all lesion samples for Shannon, but not throat (p < 0.0001).
a–gPairwise comparisons that were significantly different (p < 0.0001).