Table 1. Expression of members of Kcnj family in retina and retinal explants.
| Gene name | RNaseq |
microarray |
||||
|---|---|---|---|---|---|---|
| P7 | P14 | probe | E15 | DIV5 (P0) | DIV14 (P9) | |
| Kcnj1 |
0.01 |
0.01 |
1418614_at
1418613_at |
7.2
3.6 |
10.8
7.6 |
11.7
3.9 |
| Kcnj2 |
1.02 |
2.83 |
1422871_at
1450503_at |
4.4
8.6 |
1.5
7.9 |
26.7
1.8 |
| Kcnj3 |
3.22 |
6.74 |
1421468_at |
48.1 |
25.5 |
64.6 |
| Kcnj4 |
0.10 |
0.37 |
1451808_at |
5.1 |
4.8 |
6.5 |
| Kcnj5 |
1.34 |
6.50 |
421762_at |
1.9 |
8.6 |
5.8 |
| Kcnj6 |
2.23 |
2.63 |
11425707_a_at
1421581_at
1425044_at
1450294_a_at |
1.7
3.9
24.1
1.3 |
1.5
7.3
16
1.6 |
4.2
13.5
16.5
1 |
| Kcnj8 |
2.31 |
3.70 |
1418142_at |
3.9 |
1.5 |
3.1 |
| Kcnj9 |
3.70 |
30.0 |
1426115_a_at
1450712_at
1433029_at |
10.7
10.2
9.6 |
3.7
31.5
2.7 |
12.3
62.1
10.1 |
| Kcnj10 |
6.15 |
20.34 |
1419601_at |
20.3 |
34.8 |
50.7 |
| Kcnj11 |
3.90 |
4.25 |
1450515_at |
14.3 |
8.1 |
6.2 |
| Kcnj12 |
2.20 |
6.65 |
||||
| Kcnj13 |
0.72 |
2.18 |
1456418_at |
10.6 |
2.7 |
12.1 |
| Kcnj14 |
2.63 |
240.57 |
||||
| Kcnj15 |
0.03 |
0.03 |
1450185_at |
8.1 |
2.1 |
1.8 |
| Kcnj16 | 0.04 | 0.17 | ||||
RNA sequence was done using RNA extracted from whole retinas of wild type ICR mice. Values of expression levels are FPKM value. wt; wild type. Retinal explant was prepared from E15 retina, and gene expression pattern of culture day 0, 5 and 14 was examined by DNA microarray (Affymetrix). DIV, days in vitro.