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. Author manuscript; available in PMC: 2016 Jan 1.
Published in final edited form as: J Alzheimers Dis. 2015 Jan 1;44(3):989–994. doi: 10.3233/JAD-142106

Table 1.

Most significant SNPs in 14 genes in single-locus analysis

Gene CHR1 Base Pair
Position
Most
Significant
SNP
P-value OR2 (95%CI)3
GRB10 7 50653096 rs11770199 0.0003 0.748 (0.64-0.87)
ATP10A 15 23633521 rs11161237 0.0008 1.689 (1.24-2.29)
DLGAP2 8 1637345 rs6992443 0.0009 1.537 (1.19-1.98)
GLIS3 9 4121657 rs1340252 0.0015 1.241 (1.09-1.41)
KCNQ1 11 2504751 rs2283155 0.0017 1.218 (1.07-1.37)
PHACTR2 6 144083752 rs6915880 0.0029 0.829 (0.73-0.93)
ANO1 11 69711744 rs3740722 0.003 0.764 (0.64-0.91)
MAGI2 7 78013532 rs1978326 0.0043 0.658 (0.49-0.87)
WT1 11 32366048 rs5030328 0.0054 0.632 (0.45-0.87)
GPR1 2 206775748 rs16838070 0.0058 1.245 (1.06-1.45)
ZNF331 19 58720819 rs2708771 0.006 0.803 (0.69-0.94)
NTM 11 131287579 rs656644 0.0067 0.812 (0.69-0.94)
ZC3H12C 11 109547367 rs4754425 0.0084 0.836 (0.73-0.95)
SLC22A2 6 160558735 rs2450974 0.0088 1.331 (1.07-1.65)
1

Chromosomal location

2

Odds ratio

3

Confidence Interval