TABLE 2.

Viral response upon infection

Sample type and Affymetrix ID	Viral gene	Expression dataa
		2 dpi						3 dpi						4 dpi
		Control			Infected			Control			Infected			Control			Infected
		1	2	3	1	2	3	1	2	3	1	2	3	1	2	3	1	2	3
Bursa
Resistant birds
NC-004178.CDS1.S1_s_at	Segment A, VP5	18.74	25.09		19.5	22.21	15.65	24.87	18.84	15.91	24.51	18.47	19.45	23.08	13.9	18.49	12.25	17.85	16.99
NC-004178.CDS2.S1_at	Segment A, VP2-3-4	17.06	22.05		18.66	16.74	19.59	13.5	19.62	16.09	15.52	9.01	10.9	21.87	8.7	14.86	17.39	16.77	12.15
NC-004179.CDS1.S1_at	Segment B, VP1	8.66	11.6		4.33	14.55	12.24	9.22	0	5.09	5.69	10.99	1.5	3.33	4.48	9.99	7.18	9.95	7.28
Susceptible birds
NC-004178.CDS1.S1_s_at	Segment A, VP5	19.23	19.07	20.11	9.55	36.78		25.43	24.67	28.2	63.71	108.16	78.07	22.76	19.04		68.55	50.93	64.95
NC-004178.CDS2.S1_at	Segment A, VP2-3-4	15.51	22.04	19.22	15.39	5.95		31.69	29.1	18.29	56.2	72.77	68.43	18.18	17.26		52.09	32.28	47.9
NC-004179.CDS1.S1_at	Segment B, VP1	5.95	5.55	6.1	5.12	11.04		7.05	4.32	3.36	17.49	26.64	26.25	4.34	5.87		14.96	5.07	13.3
Spleen
Resistant birds
NC-004178.CDS1.S1_s_at	Segment A, VP5	18.71	21.86	22.9	19.1	25.23		24.97	17.98	15.31	26.13	20.16		20.18	16.88	26.93	22.88	21.6	20.54
NC-004178.CDS2.S1_at	Segment A, VP2-3-4	16.11	25.56	27.96	9.89	23.67		26.44	20.82	27.2	21.85	27.13		26.95	20.57	25.71	21.56	22.97	23.91
NC-004179.CDS1.S1_at	Segment B, VP1	4.55	1.14	0	3.05	0.01		3.01	0.01	0	1.8	5.11		0.69	0.98	0	2.93	0.4	0.96
Susceptible birds
NC-004178.CDS1.S1_s_at	Segment A, VP5	19.62	24.25	24.81	22.11	23.68	18.27	24.89	20.6	19.16	20.15	23.44	31.8	29.72	24.68	20.9	23.82	21.67	18.98
NC-004178.CDS2.S1_at	Segment A, VP2-3-4	17.66	6.83	17.66	19.8	20.62	18.75	21.63	19.46	21.29	29.75	18.58	25.87	18.17	27.85	19.54	27.21	18.84	18.51
NC-004179.CDS1.S1_at	Segment B, VP1	0.75	4.09	3.96	0	0	3.55	2.31	5.9	0	0.17	2.77	0	0.98	0	3.59	1.55	0	0

^aSignificant values are indicated in boldface.