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Run Time in Minutes for Eight Datasets by Using Cap3, Genovo, and Two DIME Methods
| DIME-cap3 | Cap3 | DIME-genovo | Genovo | |
|---|---|---|---|---|
| E. coli | 17 | 42 | 17 | 141 |
| LC | 13 | 28 | 30 | 2,702 |
| MC | 13 | 38 | 35 | 2,923 |
| HC | 7 | 36 | 25 | 3,170 |
| HCh | 146 | 418 | 756 | NA |
| Tilapia1 | 6 | 12 | 5 | 5 |
| NTS | 49 | 113 | 160 | NA |
| SRR072232 | 229 | 681 | 1,955 | NA |
DIME-cap3 and DIME-genovo were running on a 10-node Haddoop cluster. Cap3, Genovo, MetaVelvet, SOAPdenovo, and SPAdes were running on a single computing node.
