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. 2015 Jan 13;16(1):5. doi: 10.1186/s13059-014-0575-z

Table 1.

ADAR2-mediated editing events in brain and glioblastoma cells and tissues

Chr Strand miRNA U118 ADAR2 ADAR2 E/A siADAR2 P -value Pooled human brain Human frontal lobe Glioblastoma Location in pre-miR Location in mature miR
Chr9 + hsa-let-7d* 0.3 2.0 0 0.5 1.61E-10 1.2 0.7 0 66 5
Chr17 - hsa-mir-22 0 0.1 0 0.1 5.50E-34 0 0 0 67 15
Chr19 - hsa-mir-24–2* 0.1 16.4 0 7.1 <1E-155 0.8 2.3 ND 18 6
Chr19 - hsa-mir-27a* 0.1 22.5 0.1 9.8 <1E-155 ND 0 2.6 10 1
Chr21 + hsa-mir-99a 0.1 13.8 0 6.9 <1E-155 5.0 1.2 0 13 1
Chr11 - hsa-mir-100 0 0.2 0 0.1 1.22E-145 0 0 0 13 1
Chr3 + hsa-mir-138–1* 0 0.8 0 0.5 2.57E-35 2.1 0.2 ND 74 12
Chr8 - hsa-mir-151 0.1 0.3 0 0.2 5.70E-13 0.9 0.6 ND 49 3
Chr11 - hsa-mir-210 0 0.5 0 0.5 2.31E-11 ND ND 0 77 12
Chr14 + hsa-mir-411 0 12.6 0 5.6 4.31E-39 15.3 13.9 3.2 20 5
Chrx - hsa-mir-421 0.2 13.8 0.5 9.6 <1E-155 1.8 1.0 0 61 14
Chr9 + hsa-mir-455 0 14.2 0 5.7 <1E-155 1.2 0.9 0 32 17
Chr17 - hsa-mir-497 0 26.1 0 16.7 1.73E-155 6.2 0.6 0 25 2
Chrx - hsa-mir-503 0 5.9 0 1.7 8.75E-14 ND ND 0 7 2
Chr7 - hsa-mir-589* 2.3 9.5 2.2 2.9 1.36E-31 70.0 74.1 0 66 6
Chr19 - hsa-mir-641 0 17.0 0 8.8 5.83E-116 0 0 0 17 2
Chr19 - hsa-mir-641 0 3.0 0 0.9 2.45E-14 0 3.6 0 18 3
Chr10 - hsa-mir-3157* 0 69.4 0 54.5 1.55E-90 ND ND 0 70 13
Chr16 + hsa-mir-3176 0 10.9 0 8.2 6.73E-41 ND ND 0 74 15

A-to-G changes in mature miRNAs isolated from U118 cell lines (untreated, ADAR2, ADAR2 E/A, siADAR2), human brains (pooled and frontal lobe) and glioblastoma. The statistically significant modifications are marked in bold; the edited miRNAs that were not identified in our previous analysis are indicated in italics [23]; miRNAs that are both edited and modulated by ADAR2 are indicated in bold (Additional files 2 and 3).

Editing levels are represented as percentages. ND, not determined (with <10 reads).