Table 2. Summary of X-ray Data Collection and Refinement Statistics.
data collection | cpOYE303 (4RNU) | cpOYE154 (4RNX) | cpOYE303T (4RNW) | cpOYE303inh (4RNV) |
---|---|---|---|---|
space group | P1 | P1 | P21 | P1 |
cell dimensions | a = 45.67 Å, b = 87.69, c = 113.71 | a = 44.09 Å, b = 57.98 Å, c = 85.90 Å | a = 64.25 Å, b = 73.00 Å, c = 84.74 Å | a = 45.6 Å, b = 88.1 Å, c = 105.6 Å |
α = 69.34°, β = 82.60°, γ = 90.06° | α = 102.46°, β = 98.36°, γ = 111.19° | α = 90°, β = 101.27°, γ = 90° | α = 89.45°, β = 81.43°, γ = 89.88° | |
beamline (SERCAT) | APS 22-BM | APS 22-BM | APS 22-ID | APS 22-BM |
wavelength (Å) | 1 | 1 | 1 | 1 |
resolution (Å)a | 38.78–2.69 (2.79–2.69) | 27.11–1.25 (1.29–1.25) | 28.98–1.55 (1.61–1.55) | 34.8–2.47 (2.58–2.47) |
Rmergeb | 0.107(0.829) | 0.075(0.681) | 0.120(0.799) | 0.098 (0.607) |
⟨I/σI⟩c | 13.8(1.9) | 17.0(1.9) | 13.7(1.9) | 10.8 (1.8) |
completeness (%)a | 92.0(92.9) | 95.1(92.0) | 98.0(96.6) | 98.7 (97.9) |
redundancya | 6.0(5.4) | 4.2(4.0) | 5.8(5.4) | 3.2 (3.1) |
obs reflections | 253 086 | 831 001 | 629 067 | 182 865 |
unique reflectionsa | 42 123 (4241) | 196 866 (19 029) | 108 578 (10 639) | 56 814 (5641) |
Refinement | ||||
resolution (Å) | 2.69 | 1.25 | 1.55 | 2.47 |
no. reflections | 41 949 | 196 804 | 108 290 | 56 763 |
Rwork/Rfreed,e | 0.241/0.279 | 0.134/0.162 | 0.190/0.216 | 0.219/0.251 |
twin law/fraction | –h, k, k – l/0.11 | |||
no. atoms | ||||
protein | 11 891 | 6257 | 6038 | 12 144 |
solvent | 112 | 1145 | 1007 | 267 |
other heteroatoms | 144 | 62 | 92 | 160 |
B factors (Å2) | ||||
protein | 81.5 | 12.1 | 18 | 52.9 |
solvent | 44.5 | 28.4 | 31.4 | 35.8 |
other heteroatoms | 81.9 | 7.4 | 13.7 | 45.5 |
rms Deviations | ||||
bond lengths (Å) | 0.002 | 0.003 | 0.005 | 0.002 |
bond angles (deg) | 0.5 | 0.9 | 1.0 | 0.6 |
Values in parentheses correspond to highest resolution shell.
Rmerge = Σ|I – ⟨I⟩|/Σ I, where I is the observed intensity and ⟨I⟩ is the averaged intensity from multiple observations.
⟨I/σI⟩ = averaged ratio of the intensity (I) to the error of the intensity (σI).
Rwork = Σ|Fobs – Fcal|/Σ|Fobs|, where Fobs and Fcal are the observed and calculated structure factors, respectively.
Rfree was calculated using a randomly chosen subset (5%) of the reflections not used in refinement.