Figure 2.

Significant genera between the two mouse colonies

1. The relative abundance (%) of the genera Anaerostipes (A), Allobaculum (B), Desulfovibrio (C), Bacteroides (D), Parabacteroides (E) and Prevotella (F) in ileum lumen Room 1 (n = 11) and Room 2 (n = 11), ileum mucus Room 1 (n = 11) and Room 2 (n = 11), distal colon lumen Room 1 (n = 11) and Room 2 (n = 11), distal colon mucus Room 1 (n = 9) and Room 2 (n = 7), and caecum Room 1 (n = 11) and Room 2 (n = 11). Data are presented as mean ± SD. Wilcoxon's rank-sum test was conducted to compare over- or under-representation of the different genera. To correct for multiple testing, the P-values were converted to false discovery rate values (Q-values). *P < 0.001, Q < 0.001, **P < 0.001, Q < 0.01, ***P < 0.01, Q < 0.05.

Source data are available online for this figure.