Table 1. Splicing regulatory protein binding sites ASSEDA scans for and their associated effect on : splicing.

Splicing Factor	R sequence (bits)	Sequence Logo	Location-dependent effect on splicing
			Intronic	Exonic
hnRNPH1	8.9 ± 1.8		E 79, 80 / S 81, 82	S / E 83
hnRNPA1 i	4.6 ± 1.5		S / E 84	S
TIA1	7.6 ± 3.1		E	N/A
SRSF6 (SRp55)	5.2 ± 1.4		E / S 82	E / S
SRSF5 (SRp40)	4.5 ± 1.5		E / S 82	E / S 85
SRSF2 (SC35)	4.5 ± 1.6		E / S 86	E / S 87
SRSF1 (SF2/ASF) 88	5.8 ± 1.5		E / S 86, 89, 90	E / S
PTB ii	4.9 ± 1.9		S / E 91	S
ELAV1	9.6 ± 3.4		S / E / N 92, 93	S

Reported dominant effect is bolded. E – Enhancer; S – Silencer; N - Neutral.

ⁱEnhancer activity by hnRNP A1 occurs at the junction ⁸⁴. ⁱⁱPTB does not directly enhance splicing, but can do so indirectly by preventing the binding of splicing repressors ⁹¹.