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. 2015 Jan 13;43(3):1392–1406. doi: 10.1093/nar/gku1357

Table 1. Comparison gene structures in old and new annotation.

Feature Old New Add Rem Merg Split Ext Short
Introns 137 175 38 0 0 0 2 1
5′UTR 0 4906 4906 0 0 0 0 0
3′UTR 0 4923 4923 0 0 0 0 0
Proteincoding Genes 5213 5288 49 7 2 1 123 6
Pseudogenes 22 42 0 0 0 14 0 0
tRNAs 230 230 0 0 0 0 0 0
ncRNAs 10 68 58 0 0 0 6 1
rRNAs 6 6 0 0 0 0 0 0

This table compares the old and new annotation for different genomic features. As main results, we identified 49 novel protein-coding genes and 58 novel non-protein-coding genes, as well as added UTR annotation to the majority of gene. In this study, we split 14 previously annotated pseudogenes into 32 genes whose translated sequences do not contain a stop codon. Most probably these are not pseudogenes. Add = added, Rem = removed, Merg = merged, Split = splitted, Ext = extended, Short = shortened.