Table 3.
BLAST (Basic Local Alignment Search Tool) results for bacterial sequences found in soil samples
| Specific bands | Most related isolate from GenBank (% sequence similarity by BLASTa) | GenBank accession no. |
|---|---|---|
| Band 1 | Uncultured Firmicutes bacterium clone GASP-KA1S3_F05 16S ribosomal RNA gene, partial sequence (98 %) | EU297149.1 |
| Band 2 | Uncultured Cyanobacterium clone GASP-MA2S2_E12 16S ribosomal RNA gene, partial sequence (98 %) | EF662970.1 |
| Band 3 | Uncultured Myxococcales bacterium clone Plot18-E05 16S ribosomal RNA gene, partial sequence (99 %) | FJ889278.1 |
| Band 4 | Uncultured Acidobacteria bacterium clone S2-046 16S ribosomal RNA gene, partial sequence (99 %) | KF182982.1 |
| Band 5 | Uncultured beta proteobacterium partial 16S rRNA gene, clone pLA12 (100 %) | HF934065.1 |
| Band 6 | Uncultured gamma proteobacterium gene for 16S rRNA, partial sequence, isolate: sd-jx75 (100 %) | AB690765.1 |
| Band 7 | Uncultured Acidobacteria bacterium clone Acido.wet.ACETH07 16S ribosomal RNA gene, partial sequence (100 %) | GU374498.1 |
| Band 8 | Uncultured Acidobacteriaceae bacterium clone CS6 16S ribosomal RNA gene, partial sequence (99 %) | JQ771962.1 |
a97 % sequence similarity is the minimum requirement for identity to the species level (Stackebrandt and Goebel 1994)