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. 2015 Jan 21;16(Suppl 2):S7. doi: 10.1186/1471-2164-16-S2-S7

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Copyright © 2015 Nariai et al.; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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The generative model of read data in HLA-VBSeq. The read abundance parameter, indicator variable for the HLA allele choice, nucleotide sequence of the first and second pair of read n are represented by θ, Z_nt, $R_{n}^{1}$ and $R_{n}^{2}$ , respectively.