Table 2. Specificity constant values of CcPDH for various monosaccharides.
Side group orientations in the 1 C 4 conformation a | Kinetic parameters | |||||||
---|---|---|---|---|---|---|---|---|
C-2 | C-3 | C-4 | C-5 | k cat (s-1) | K m (mM) | k cat/K m(×103 s-1M-1) | Relative velocity c | |
d-glucosone b | E (C-3) | E (C-4) | A (C-5) | - (C-6) | 74.1 (±1.4) | 7.9 (±0.3) | 9.37 | 100 |
l-fucose b | E | E | A | E (-CH3) | 56.4 (±1.8) | 24.8 (±1.2) | 2.27 | 77.7 |
d-arabinose b | E | E | A | - | 35.5 (±0.6) | 30.3 (±0.8) | 1.17 | 47.5 |
l-galactose | E | E | A | E (-CH2OH) | 56.1(±1.1) | 49.7 (±1.4) | 1.13 | 65.4 |
d-talose | E | A | E | A (-CH2OH) | 17.8 (±0.1) | 23.1 (±0.4) | 0.77 | 24.8 |
l-gulose b | E | A | A | E (-CH2OH) | 53.3 (±1.1) | 84.7 (±2.6) | 0.63 | 52.1 |
d-lyxose b | E | A | A | - | 12.9 (±0.3) | 66.8 (±2.6) | 0.19 | 13.4 |
l-xylose | E | E | E | - | 22.4 (±1.2) | 236 (±16) | 0.09 | 11.9 |
l-glucose | E | E | E | E (-CH2OH) | 24.9 (±1.2) | 363 (±17) | 0.07 | 9.2 |
l-lyxose | A | E | E | - | n.d. d | n.d. | - | 4.0 |
l-mannose | A | E | E | E (-CH2OH) | n.d. | n.d. | - | 3.6 |
l-rhamnose | A | E | E | E (-CH3) | n.d. | n.d. | - | 0.7 |
a Carbon numbers of d-glucosone in brackets; E, equatorial bond; A, axial bond.
b Data for the kinetic parameters are taken from Ref. (5).
c The velocity with each substrate is expressed relative to 100 for the velocity with d-glucosone. The initial substrate concentration was 30 mM d-glucosone and 100 mM the others monosaccharides.
d n.d., not determined.