Table 1.
Functional annotations using transcript BLAST analyses.
| Database | Hit unigenes number | Percent (hit/total) |
|---|---|---|
| NT | 65303 | 95.8% |
| NR | 52210 | 76.6% |
| SWISS-PROT | 32410 | 47.6% |
| COG | 17643 | 25.9% |
| KEGG | 47564 | 69.8% |
| GO | 23568 | 34.6% |
| InterPro | 27935 | 41.0% |
| Rice | 54190 | 79.5% |
NT: the nonredundant nucleotide database; NR: the nonredundant protein database; SWISS-PROT: SWISS-PROT database; COG: the Clusters of Orthologous Groups of proteins database; KEGG: the Kyoto Encyclopedia of Genes and Genomes database; GO: the Gene Ontology Consortium database; InterPro: InterPro domains database; Rice: Os-Nipponbare-Reference-IRGSP-1.0.