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. Author manuscript; available in PMC: 2015 Feb 19.
Published in final edited form as: Cancer Res. 2012 Aug 3;72(19):4909–4919. doi: 10.1158/0008-5472.CAN-12-2194

Table 1. List of genes differentially expressed in 131/4-5B1, 131/4-5B2, and 113/6-4L versus WM239.

Average fold change t test P-value Common Description
Upregulated
5.2 3.7E-06 D2S448 Melanoma-associated gene
4.2 2.0E-06 IGFBP3 Insulin-like growth factor binding protein 3
4.0 1.6E-08 XAGE1 X antigen family, member 1
3.7 1.5E-09 GAGE7 G antigen 7
3.5 1.1E-09 GAGE7B G antigen 7B
3.3 1.0E-09 GAGES G antigen 5
3.2 5.0E-08 PAGES P antigen family, member 5 (prostate associated)
3.2 8.7E-09 GAGE4 G antigen 4
2.7 1.6E-06 SFRP1 Secreted frizzled-related protein 1
2.5 1.5E-06 GAGE1 G antigen 1
2.5 4.3E-06 GAGEE3 G antigen, family E, 3
2.3 1.1E-05 TM4SF19 Transmembrane 4 L 6 family member 19
2.3 1.4E-05 GAGES G antigen 3
2.2 2.5E-05 TMSL2 Thymosin-like 2
2.2 5.6E-08 HLA-B Major histocompatibility complex, class I, B
2.2 5.5E-06 TMSLB Thymosin-like 6
2.1 2.5E-05 GAGE6 G antigen 6
2.1 1.1E-05 TMSL3 Thymosin-like 3
2.1 1.3E-04 TMSB4X Thymosin, beta 4, X-linked
2.1 1.6E-04 TMSL4 Thymosin-like 4
2.0 B.0E-05 TMSL1 Thymosin-like 1
2.0 1.6E-05 HLA-H Major histocompatibility complex, class I, H (pseudogene)
1.6 1.7E-05 HLA-C Major histocompatibility complex, class I, C
1.8 4.9E-05 SCML4 sex comb on midleg-like 4 (Drosophila)
1.6 1.5E-04 TM7SF1 Transmembrane 7 superfamily member 1 (upregulated in kidney)
1.5 1.4E-04 DKFZP566N034 Hypothetical protein DKFZp566N034
Downregulated
0.65 2.9E-05 SMS Spermine synthase
0.64 3.4E-05 PLOD1 Procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1
0.62 8.0E-05 ASPH Aspartate beta-hydroxylase
0.62 1.7E-05 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1
0.59 9.7E-07 C19orl28 Chromosome 19 open reading frame 28
0.5B 1.2E-04 LY96 Lymphocyte antigen 96
0.52 3.8E-04 FABP7 Fatty acid binding protein 7, brain
0.52 4.4E-06 RND3 Rho family GTPase 3
0.48 4.9E-05 CDH19 Cadherin 19, type 2
0.43 1.4E-04 SPP1 Secreted phosphoprotein 1 (osteopontin, bone sialoprotein I)
0.43 1.1E-05 DKFZp761 D112 Hypothetical protein DKFZp761D112
0.43 9.4E-07 OVOS2 Ovostatin 2
0.39 5.4E-06 MGST1 Microsomal glutathione S-transferase 1
0.31 3.9E-07 na Hypothetical gene supported by BC034933; BC068085