Table 4.
Number of genes associated with the general COG functional categories
| Code | Value | % age | Description |
|---|---|---|---|
| J |
149 |
4.0 |
Translation, ribosomal structure and biogenesis |
| A |
3 |
0.0 |
RNA processing and modification |
| K |
216 |
5.7 |
Transcription |
| L |
223 |
5.9 |
Replication, recombination and repair |
| B |
4 |
0.1 |
Chromatin structure and dynamics |
| D |
32 |
0.9 |
Cell cycle control, cell division, chromosome partitioning |
| Y |
0 |
0.0 |
Nuclear structure |
| V |
83 |
2.2 |
Defense mechanisms |
| T |
213 |
5.7 |
Signal transduction mechanisms |
| M |
237 |
6.3 |
Cell wall/membrane/envelope biogenesis |
| N |
193 |
5.1 |
Cell motility |
| Z |
0 |
0.0 |
Cytoskeleton |
| W |
0 |
0.0 |
Extracellular structures |
| U |
250 |
6.7 |
Intracellular trafficking, secretion, and vesicular transport |
| O |
140 |
3.7 |
Posttranslational modification, protein turnover, chaperones |
| C |
166 |
4.4 |
Energy production and conversion |
| G |
190 |
5.1 |
Carbohydrate transport and metabolism |
| E |
208 |
5.6 |
Amino acid transport and metabolism |
| F |
61 |
1.6 |
Nucleotide transport and metabolism |
| H |
131 |
3.5 |
Coenzyme transport and metabolism |
| I |
98 |
2.6 |
Lipid transport and metabolism |
| P |
258 |
6.9 |
Inorganic ion transport and metabolism |
| Q |
68 |
1.8 |
Secondary metabolites biosynthesis, transport and catabolism |
| R |
461 |
12.3 |
General function prediction only |
| S |
356 |
9.5 |
Function unknown |
| - | 1,645 | 33.8 | Not in COGs |