Table 1. Sequence variations of GPM1 and PRA1 in clinical C. albicans isolates.
GPM1 | PRA1 | |||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Isolate | Infection site | G255 | C399 | C402 | T675 | A73 | A210 | G240 | C270 | C288 | A303 | G314 | T332 | C387 | T411 | T460 | G475 | G600 | T603 | A654 | T765 | |
low | # 11 | Sacral | GG | CC | CC | AA | GG | AG | GG | CC | CC | AA | GA | TT | CT | TT | TT | GG | GG | TT | AA | AA |
# 3 | Oral cavity | no | no | no | no | GG | GG | GG | GG | TT | CC | GG | TT | TT | CC | AA | AA | AA | CC | AA | TT | |
medium | # 5 | Oral cavity | AA | TT | TT | TT | GG | AG | GG | CG | CT | AA | GG | TT | CT | TC | TT | GG | GG | TT | AA | TT |
# 6 | Tongue | GG | TT | TT | TT | GG | AA | GG | CC | CC | AA | GG | TT | CT | TT | TT | GG | GG | TT | AA | TT | |
# 4 | Oral cavity | GG | CT | CT | TT | GG | AG | GG | CG | TT | AC | GG | TT | TT | CC | TT | GG | GG | TT | AA | TT | |
# 9 | Oral cavity | GG | CC | CC | AA | GG | GG | GG | GG | TT | CC | GG | TT | TT | CC | TT | GG | GG | TT | AA | TT | |
# 8 | Tracheal secretion | GG | CC | CC | AA | GG | AG | GG | CC | CC | AA | GA | TT | CT | TT | TT | GG | GG | TT | AA | TT | |
# 13 | Foot | GA | TT | TT | TT | GG | AA | GG | CC | CC | AA | GG | TT | CT | TT | TT | GG | GG | TT | AA | TT | |
high | # 1 | Oral cavity | GG | CC | CC | AA | GG | GG | GG | GG | CC | AA | AA | TT | TT | TT | TT | GG | AA | TT | TT | TT |
# 10 | Inguinal | GG | CC | CC | TT | GG | AA | GG | CC | CT | AA | GG | TT | TT | CC | AA | AA | AA | CC | AA | TT | |
# 2 | Oral cavity | GA | TT | TT | TT | GG | AG | GA | CC | CC | AA | GA | TG | CT | TT | TT | GG | GG | TT | AA | TT | |
# 12 | Foot | GG | CT | CC | TT | GG | AG | GG | CC | CC | AA | GG | TT | CC | TC | TT | GG | GG | TT | AA | TT | |
# 7 | Palate | AA | TT | TT | TA | GG | AA | GG | CC | CC | AA | GG | TT | CT | TC | TT | GG | GG | TT | AA | TT | |
allele frequency | n | 6 | 12 | 11 | 9 | 26 | 12 | 1 | 8 | 7 | 4 | 4 | 1 | 17 | 11 | 4 | 4 | 6 | 4 | 2 | 2 | |
strains | hom | 2 | 5 | 5 | 4 | 13 | 3 | 0 | 3 | 3 | 2 | 1 | 0 | 5 | 4 | 2 | 2 | 3 | 2 | 1 | 1 | |
het | 2 | 2 | 1 | 1 | 0 | 6 | 1 | 2 | 1 | 0 | 2 | 1 | 7 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |