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Proceedings of the National Academy of Sciences of the United States of America logoLink to Proceedings of the National Academy of Sciences of the United States of America
. 1973 May;70(5):1326–1330. doi: 10.1073/pnas.70.5.1326

Accessibility of DNA in Chromatin to DNA Polymerase and RNA Polymerase

Bert Silverman 1, Alfred E Mirsky 1
PMCID: PMC433489  PMID: 4576015

Abstract

The accessibility of DNA in chromatin to both exogenous DNA polymerase and RNA polymerase is slight when compared to isolated DNA. DNA in extracted chromatin is somewhat more accessible to these enzymes than is DNA in the chromatin of isolated nuclei; and the DNA template of chromatin is more accessible to DNA polymerase than to RNA polymerase. In these experiments we have given much attention to the technique of scintillation counting, since artifacts arising in this procedure can lead to erroneous conclusions.

Keywords: chromatin, DNA polymerase, RNA polymerase

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Selected References

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  1. ALLFREY V. G., MIRSKY A. E., OSAWA S. Protein synthesis in isolated cell nuclei. J Gen Physiol. 1957 Jan 20;40(3):451–490. doi: 10.1085/jgp.40.3.451. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. CHAMBERLIN M., BERG P. Deoxyribo ucleic acid-directed synthesis of ribonucleic acid by an enzyme from Escherichia coli. Proc Natl Acad Sci U S A. 1962 Jan 15;48:81–94. doi: 10.1073/pnas.48.1.81. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. CHAUVEAU J., MOULE Y., ROUILLER C. Isolation of pure and unaltered liver nuclei morphology and biochemical composition. Exp Cell Res. 1956 Aug;11(2):317–321. doi: 10.1016/0014-4827(56)90107-0. [DOI] [PubMed] [Google Scholar]
  4. Chambon P., Karon H., Ramuz M., Mandel P. The influence of ionic strength and a polyanion on transcription in vitro. II. Effects on the template efficiency of rat liver chromatin for a purified bacterial RNA polymerase. Biochim Biophys Acta. 1968 May 21;157(3):520–531. [PubMed] [Google Scholar]
  5. DINGMAN C. W., SPORN M. B. STUDIES ON CHROMATIN. I. ISOLATION AND CHARACTERIZATION OF NUCLEAR COMPLEXES OF DEOXYRIBONUCLEIC ACID, RIBONUCLEIC ACID, AND PROTEIN FROM EMBRYONIC AND ADULT TISSUES OF THE CHICKEN. J Biol Chem. 1964 Oct;239:3483–3492. [PubMed] [Google Scholar]
  6. DeLange R. J., Smith E. L. Histones: structure and function. Annu Rev Biochem. 1971;40:279–314. doi: 10.1146/annurev.bi.40.070171.001431. [DOI] [PubMed] [Google Scholar]
  7. FURTH J. J., HURWITZ J., ANDERS M. The role of deoxyribonucleic acid in ribonucleic acid synthesis. I. The purification and properties of ribonucleic acid polymerase. J Biol Chem. 1962 Aug;237:2611–2619. [PubMed] [Google Scholar]
  8. HUANG R. C., BONNER J. Histone, a suppressor of chromosomal RNA synthesis. Proc Natl Acad Sci U S A. 1962 Jul 15;48:1216–1222. doi: 10.1073/pnas.48.7.1216. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Haines M. E., Wickremasinghe R. G., Johnston I. R. Purification and partial characterisation of rat-liver nuclear DNA polymerase. Eur J Biochem. 1972 Nov 21;31(1):119–129. doi: 10.1111/j.1432-1033.1972.tb02508.x. [DOI] [PubMed] [Google Scholar]
  10. Howk R., Wang T. Y. DNA polymerase from rat liver chromosomal proteins. I. Partial purification and general characteristics. Arch Biochem Biophys. 1969 Sep;133(2):238–246. doi: 10.1016/0003-9861(69)90451-2. [DOI] [PubMed] [Google Scholar]
  11. Kamiyama M., Wang T. Y. Activated transcription from rat liver chromatin by non-histone proteins. Biochim Biophys Acta. 1971 Jan 28;228(2):563–576. doi: 10.1016/0005-2787(71)90062-1. [DOI] [PubMed] [Google Scholar]
  12. Kraemer R. J., Coffey D. S. The interaction of natural and synthetic polyanions with mammalian nucleo. I. DNA synthesis. Biochim Biophys Acta. 1970 Dec 14;224(2):553–567. [PubMed] [Google Scholar]
  13. LITTAU V. C., ALLFREY V. G., FRENSTER J. H., MIRSKY A. E. ACTIVE AND INACTIVE REGIONS OF NUCLEAR CHROMATIN AS REVEALED BY ELECTRON MICROSCOPE AUTORADIOGRAPHY. Proc Natl Acad Sci U S A. 1964 Jul;52:93–100. doi: 10.1073/pnas.52.1.93. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. MIRSKY A. E., RIS H. The composition and structure of isolated chromosomes. J Gen Physiol. 1951 May;34(5):475–492. doi: 10.1085/jgp.34.5.475. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Mirsky A. E., Silverman B. Blocking by histones of accessibility to DNA in chromatin. Proc Natl Acad Sci U S A. 1972 Aug;69(8):2115–2119. doi: 10.1073/pnas.69.8.2115. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Mirsky A. E. The structure of chromatin. Proc Natl Acad Sci U S A. 1971 Dec;68(12):2945–2948. doi: 10.1073/pnas.68.12.2945. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. PELLING C. RIBONUKLEINSAEURE-SYNTHESE DER RIESENCHROMOSOMEN. AUTORADIOGRAPHISCHE UNTERSUCHUNGEN AN CHIRONOMUS TENTANS. Chromosoma. 1964 Apr 1;15:71–122. doi: 10.1007/BF00326915. [DOI] [PubMed] [Google Scholar]
  18. Paul J., Gilmour R. S. Organ-specific restriction of transcription in mammalian chromatin. J Mol Biol. 1968 Jul 14;34(2):305–316. doi: 10.1016/0022-2836(68)90255-6. [DOI] [PubMed] [Google Scholar]
  19. Pederson T. Chromatin structure and the cell cycle. Proc Natl Acad Sci U S A. 1972 Aug;69(8):2224–2228. doi: 10.1073/pnas.69.8.2224. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. RICHARDSON C. C., SCHILDKRAUT C. L., APOSHIAN H. V., KORNBERG A. ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLEIC ACID. XIV. FURTHER PURIFICATION AND PROPERTIES OF DEOXYRIBONUCLEIC ACID POLYMERASE OF ESCHERICHIA COLI. J Biol Chem. 1964 Jan;239:222–232. [PubMed] [Google Scholar]
  21. Schwimmer S., Bonner J. Nucleohistone as template for the replication of DNA. Biochim Biophys Acta. 1965 Sep 6;108(1):67–72. doi: 10.1016/0005-2787(65)90108-5. [DOI] [PubMed] [Google Scholar]
  22. Spelsberg T. C., Hnilica L. S. Proteins of chromatin in template restriction. I. RNA synthesis in vitro. Biochim Biophys Acta. 1971 Jan 1;228(1):202–211. doi: 10.1016/0005-2787(71)90560-0. [DOI] [PubMed] [Google Scholar]
  23. Tan E. M., Lerner R. A. An immunological study of the fates of nuclear and nucleolar macromoleculus during the cell cycle. J Mol Biol. 1972 Jul 14;68(1):107–114. doi: 10.1016/0022-2836(72)90266-5. [DOI] [PubMed] [Google Scholar]
  24. Yu F. L., Feigelson P. The rapid turnover of RNA polymerase of rat liver nucleolus, and of its messenger RNA. Proc Natl Acad Sci U S A. 1972 Oct;69(10):2833–2837. doi: 10.1073/pnas.69.10.2833. [DOI] [PMC free article] [PubMed] [Google Scholar]

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