Table 1. Methylation motif analysis of C. jejuni F38011 wild-type isolate, as assessed by PacBio sequencing.
Motif | Consensus Sequence | Modified Position | Modification Type | % Motifs Detected | # of Motifs Detected | # of Motifs in Genome | Mean Modification QV | Mean Motif Coverage | Partner Motif |
---|---|---|---|---|---|---|---|---|---|
1 | RAATTY | 3 | m6A | 99.74 | 27986 | 28058 | 251.3 | 167 | RAATTY |
2 | GKAAYC | 4 | m6A | 100 | 820 | 820 | 274.6 | 179.4 | |
3 | GAGNNNNNRTG | 2 | m6A | 99.73 | 752 | 754 | 238.9 | 181.3 | CAYNNNNNCTC |
4 | CTANNNNNNNNTAYC | 3 | m6A | 100 | 206 | 206 | 267.7 | 191.9 | GRTANNNNNNNNTAG |
5 | ANNNNCGNAAATTY | 6 | m4C | 40.26 | 31 | 77 | 122 | 188.1 | |
Not Clustered | 0 | 0.47 | 16068 | 3398079 | 43.9 | 191.5 |