Table 4. Methylation motif analysis of C. jejuni F38011 ΔCjh_00185 mutant, as assessed by PacBio sequencing.
Motif | Consensus Sequence | Modified Position | Modification Type | % Motifs Detected | # of Motifs Detected | # of Motifs in Genome | Mean Modification QV | Mean Motif Coverage | Partner Motif |
---|---|---|---|---|---|---|---|---|---|
1 | RAATTY | 3 | m6A | 99.28 | 27603 | 27804 | 213.5 | 158.1 | RAATTY |
2 | GKAAYC | 4 | m6A | 99.63 | 810 | 813 | 228.6 | 160.8 | |
3 | GAGNNNNNRTG | 2 | m6A | 98.78 | 729 | 738 | 205.5 | 164.2 | CAYNNNNNCTC |
4 | CTANNNNNNNNTAYC | 3 | m6A | 99.51 | 205 | 206 | 222.8 | 167.2 | GRTANNNNNNNNTAG |
Not Clustered | 0 | 0.26 | 8739 | 3353373 | 42.7 | 167.5 |