Table 5.
Summary of rust resistance QTL identified in the S7 population detailing the QTL location on consensus map, additive effect and significance level across 2 sites (BIL03 IRR and BIL03 nonIRR and the combined analysis, BIL03 overall )
| Allele effects b | |||||
|---|---|---|---|---|---|
| QTL ID | LG | Peak cM a | BIL03 IRR | BIL03 nonIRR | BIL03 overall |
| QRustR_S7_1.1 | 1 | 19.94 | -0.170** | NS | NS |
| QRustR_S7_1.2 | 1 | 61.5 | 0.245** | NS | NS |
| QRustR_S7_1.3 | 1 | 151.33 | -0.133** | NS | NS |
| QRustR_S7_2.1 | 2 | 144.02 | 0.195** | NS | NS |
| QRustR_S7_3.1 | 3 | 10.58 | 0.191** | NS | NS |
| QRustR_S7_3.2 | 3 | 107.3014 | -0.225** | -0.122** | -0.119** |
| QRustR_S7_3.3 | 3 | 137.16 | -0.129** | NS | NS |
| QRustR_S7_4.1 | 4 | 71.44 | 0.169*** | 0.148*** | 0.150*** |
| QRustR_S7_4.2 | 4 | 82.8 | 0.303** | 0.200*** | 0.202*** |
| QRustR_S7_4.3 | 4 | 95.7 | NS | 0.122** | 0.125** |
| QRustR_S7_5.1 | 5 | 75.65 | -0.223** | NS | NS |
| QRustR_S7_7.1 | 7 | 131.58 | NS | 0.133** | NS |
| QRustR_S7_8.1 | 8 | 70.7 | -0.221*** | -0.165*** | -0.159*** |
| QRustR_S7_9.1 | 9 | 52.72 | NS | -0.127** | -0.169** |
| QRustR_S7_9.2 | 9 | 87.27 | NS | -0.145** | -0.146** |
| QRustR_S7_9.3 | 9 | 108.8 | NS | -0.118** | -0.111** |
| QRustR_S7_10.1 | 10 | 59.84 | NS | -0.124** | -0.121** |
| QRustR_S7_10.2 | 10 | 75.9 | NS | -0.129** | -0.137*** |
| QRustR_S7_10.3 | 10 | 103.29 | -0.152** | NS | NS |
aPeak position with maximum –log10P; bThe allelic effects are calculated as the effect of substitution of AA (R931945-2-2) allele by BB (S. bicolor subsp. verticilliflorum) allele. NS: not significant; **Significant (−log10P ≥ 3); ***Highly significant (−log10P ≥ 4).