Table 3.
Family no. | Ka / Ks a | ω b | 2Δln | Family no. | Ka / Ks a | ω b | 2Δln |
---|---|---|---|---|---|---|---|
F. vesca | P. bretschneideri | ||||||
0 | 0.65 | 0.64 | 178.25** | 28 | 0.69 | 0.65 | 127.83** |
M. domestica | 29 | 0.49 | 0.55 | 26.94** | |||
0 | 0.71 | 0.72 | 130.72** | 32 | 0.74 | 0.82 | 86.53** |
1 | 0.78 | 0.80 | 169.72** | 37 | 0.88 | 0.92 | 34.57** |
3 | 0.61 | 0.64 | 77.86** | 39 | 0.73 | 0.55 | 70.55** |
4 | 0.70 | 0.70 | 34.50** | P. persica | |||
7 | 0.70 | 0.79 | 39.21** | 1 | 0.61 | 0.58 | 46.66** |
9 | 0.88 | 1.15 | 269.70** | 2 | 0.78 | 0.69 | 200.14** |
10 | 0.71 | 0.65 | 127.61** | 3 | 0.54 | 0.53 | 87.14** |
13 | 0.53 | 0.65 | 151.63** | 5 | 0.51 | 0.47 | 22.47** |
14 | 0.88 | 0.67 | 275.29** | 6 | 0.56 | 0.54 | 12.24** |
15 | 0.77 | 0.68 | 263.14** | 7 | 0.87 | 0.95 | 404.73** |
16 | 0.78 | 0.87 | 289.13** | 8 | 0.87 | 0.82 | 173.19** |
23 | 0.97 | 1.06 | 177.42** | 9 | 0.81 | 0.81 | 132.38** |
24 | 0.60 | 0.61 | 27.06** | 11 | 0.66 | 0.59 | 186.11** |
25 | 0.74 | 0.70 | 155.33** | 12 | 0.83 | 0.65 | 92.60** |
P. bretschneideri | 14 | 0.78 | 0.73 | 60.48** | |||
2 | 0.54 | 0.57 | 292.28** | 16 | 0.84 | 0.82 | 49.62** |
3 | 0.69 | 0.75 | 169.17** | P. mume | |||
4 | 0.65 | 0.76 | 143.59** | 0 | 1.15 | 1.31 | 257.80** |
6 | 0.72 | 0.74 | 6.79* | 2 | 0.89 | 1.03 | 333.07** |
7 | 0.80 | 0.86 | 108.95** | 4 | 0.52 | 0.58 | 18.40** |
10 | 0.65 | 0.69 | 127.79** | 6 | 0.80 | 0.81 | 173.58** |
11 | 0.88 | 0.93 | 161.28** | 8 | 0.97 | 1.02 | 125.15** |
14 | 0.65 | 0.67 | 125.28** | 10 | 0.60 | 0.51 | 30.89** |
16 | 0.92 | 0.92 | 259.19** | 11 | 0.56 | 0.54 | 132.21** |
17 | 0.78 | 0.88 | 35.67** | 12 | 0.89 | 0.94 | 344.19** |
19 | 0.86 | 0.99 | 142.46** | 14 | 0.92 | 0.94 | 313.67** |
21 | 1.08 | 1.25 | 130.03** | 16 | 0.75 | 0.71 | 99.29** |
22 | 0.69 | 0.65 | 196.90** | 19 | 0.79 | 0.77 | 49.99** |
25 | 0.56 | 0.47 | 51.69** | 20 | 0.89 | 0.92 | 127.40** |
26 | 0.64 | 0.60 | 62.54** |
aAverage Ka/Ks ratio of each gene family calculated by MEGA; b dN/dS ratio for each gene family using branch model; 2Δln represents the result of LR test for site model; * and ** represent significant (2Δln > 5.991, p < 0.05) and highly significant (2Δln > 9.210, p < 0.01) tests for positive selection between model M7 and M8.