Table 1. Epidemiological data on the 74 Acinetobacter baumannii isolates included in this study.
| Isolate | Date and place of isolation a | Source and type of sample a | Import and other epidemiological data a | ST / CST a | GenBank accession no., [reference] |
|---|---|---|---|---|---|
| K48–42 | Feb 2008, Unilabs Telelab, Skien, Norway | Tracheal aspirate | Import from India | ST1 / CST6 | KM998765, [23] |
| K55–61 | Mar 2009, Vestfold Hospital, Vestfold, Norway | Abdominal cavity | Import from India | ST94 / CST13 | KM998766, [23] |
| K57–06 | Mar 2009, Oslo University Hospital (Ullevål), Oslo, Norway | Trachael aspirate | Import from India, same PFGE pattern as K55–61 | ST94 / CST13 | [23] |
| AO-471 | 2005, Karolinska University Hospital, Stockholm, Sweden | Wound | Import from Thailand, tsunami-related | ST25 / CST30 | KM998767, [24] |
| AO-21841 | 2006, Karolinska University Hospital, Stockholm, Sweden | Intra-abdominal | No history of import | ST25 / CST31 | KM998768, [24] |
| K63–58 | Mar 2010, Oslo University Hospital (Ullevål), Oslo, Norway | Cerebrospinal fluid | Import from Iraq | ST94 / CST12 | KM998769 |
| 50509585 | May 2011, Oslo University Hospital (Aker), Oslo, Norway | Trachael aspirate | Import from Greece | ST1 / CST8 | KM998770 |
| 50525357 | Jul 2011, Haukeland University Hospital, Bergen, Norway | Drain tube | Import from Romania | ST1 / CST9 | KM998771 |
| 50535631 | Sep 2012, Vestfold Hospital, Vestfold, Norway | Perineum | Import from Thailand | ST25 / CST20 | KM998772 |
| 50678066 | Dec 2012, Innlandet Hospital, Levanger, Norway | Tracheal | Import from Thailand | ST25 / CST19 | KM998773 |
| 50691529 | Feb 2013, Oslo University Hospital (Ullevål), Oslo, Norway | Urine | Import from Thailand | ST25 / CST19 | Our unpublished data |
| 50695882 | Feb 2013, Sørlandet Hospital, Kristiansand, Norway | Urine | No history of import | ST1 / CST8 | Our unpublished data |
| A068 | Apr 2012, Blekinge Hospital, Blekinge, Sweden | - | - | ST25 / CST23 | KM998774 |
| A069 | May, 2012, Halmstad Hospital, Halland, Sweden | Feces | Import from Thailand | ST25 / CST19 | Our unpublished data |
| A076 | Jan 2013, Skåne University Hospital, Skåne, Sweden | Rectum | - | ST1 / CST1 | KM998775 |
| A082 | Mar 2013, Linköping University Hospital, Östergötland, Sweden | Wound | - | ST1 / CST4 | KM998776 |
| A092 | Mar 2013, Linköping University Hospital, Östergötland, Sweden | Blood | - | ST25 / CST23 | Our unpublished data |
| A093 | Mar 2013, Linköping University Hospital, Östergötland, Sweden | - | - | ST25 / CST23 | Our unpublished data |
| A094 | Mar 2013, Linköping University Hospital, Östergötland, Sweden | Feces | - | ST25 / CST23 | Our unpublished data |
| A096 | Mar 2013, Linköping University Hospital, Östergötland, Sweden | Thorax | - | ST25 / CST23 | Our unpublished data |
| A097 | Mar 2013, Linköping University Hospital, Östergötland, Sweden | Nose | - | ST25 / CST23 | Our unpublished data |
| A100 | Oct 2013, Skåne University Hospital, Skåne, Sweden | - | - | ST1 / CST5 | KM998777 |
| RUH1486 | 1985, Rotterdam, Netherlands | Umbilicus | - | ST25 / CST29 | KM998778, [12] |
| LUH7841 | 2002, Leiden, Netherlands | Intra-venous catheter tip | - | ST402 / CST15 | KM998779 |
| LUH6220 | 2000, Leiden, Netherlands | Sputum | - | ST25 / CST16 | KM998780 |
| 4390 | 2003, Hippokration, Athens, Greece | Bronchial | Representing 3 isolates with the same PFGE pattern | ST25 / CST16 | [40] |
| 161/07 | 2007, Frankfurt University Hospital, Frankfurt, Germany | Respiratory tract | Import from Serbia | ST25 / CST28 | KM998781, [41] |
| NM3 | 2008, Abu Dhabi, UAE | Sputum | Representing 4 isolates with the same PFGE pattern | ST25 / CST23 | [39] |
| 741019 | 2011, H7, Buenos Aires, Argentina | Pleural Fluid | Representing 7 isolates with the same PFGE pattern collected from 3 hospitals | ST25 / CST24 | KM998782, [38] |
| 4190 | 2009, Monaldi Hospital, Naples, Italy | Blood | Representing 3 isolates with the same PFGE pattern | ST25 / CST32 | KM998783, [17, 20] |
| AYE | 2001, Kremlin-Bicetre, France | Patient with pneumonia and urinary tract infection | Epidemic in 54 healthcare facilities in eight French administrative regions | ST1 / CST7 | CU459141, [42] |
| AB0057 | 2004, WRAMC, Washington DC, USA | Blood | WRAMC was the major USA site receiving casualties from the conflict in Iraq/Kuwait and Afghanistan | ST1 / CST1 | CP001182, [33] |
| Canada BC1 | 2007, a civilian hospital, Canada | - | Due to nosocomial spread of a war-related isolate introduced by a soldier evacuated via Landstuhl Regional Medical Center (Germany) | ST1 / CST1 | AMSZ00000000 |
| Canada BC-5 | 2007, a civilian hospital, Canada | - | Due to nosocomial spread of a war-related isolate introduced by a soldier evacuated via Landstuhl Regional Medical Center (Germany) | ST1 / CST1 | AFDN00000000 |
| IS-58 | Feb 2008, Ibn Sina, Iraq | Respiratory tract | - | ST1 / CST1 | AMGH00000000 |
| IS-235 | Aug 2008, Ibn Sina, Iraq | Blood | - | ST1 / CST1 | AMEI00000000 |
| IS-251 | Sep 2008, Ibn Sina, Iraq | Respiratory tract | - | ST1 / CST1 | AMEJ00000000 |
| AB5075 | 2009, WRAMC, Maryland, USA | Bone infection | - | ST1 / CST1 | AHAH00000000, [34] |
| AB_908–13 | 2007, Centers for Disease Control, USA | Urine | - | ST1 / CST1 | AMHW00000000, [43] |
| AB_909–02–7 | 2007, Centers for Disease Control, USA | Sputum | - | ST1 / CST1 | AMHZ00000000, [43] |
| TG20277 | Jun 2006, Landstuhl Regional Medical Center, Landstuhl, Germany | Sputum | Isolated from a Canadian soldier injured in Afghanistan | ST1 / CST1 | ASFH00000000 |
| TG22112 | 2011, Arizona State Labs, USA | Trachael aspirate | - | ST1 / CST1 | ASFK00000000 |
| TG22148 | 2011, Arizona State Labs, USA | Trachael aspirate | - | ST1 / CST1 | ASFN00000000 |
| TG22190 | 2011, Arizona State Labs, USA | Trachael aspirate | - | ST1 / CST1 | ASFP00000000 |
| TG22194 | 2011, Arizona State Labs, USA | Trachael aspirate | - | ST1 / CST1 | ASFR00000000 |
| TG22196 | 2011, Arizona State Labs, USA | Blood | - | ST1 / CST1 | ASFS00000000 |
| TG22214 | 2011, Arizona State Labs, USA | Sputum | - | ST1 / CST1 | ASFX00000000 |
| 1605 | J. Craig Venter Institute, USA | - | - | ST1 / CST1 | AUWL00000000 |
| Naval-83 | Oct 2006, National Naval Medical Center, Bethesda, Maryland, USA | Wound | - | ST20 / CST3 | AMFK00000000 |
| ABNIH19 | 2009, National Institutes of Health Clinical Center, Bethesda, Maryland, USA | Trachael aspirate | - | ST1 / CST2 | APBH00000000, [44] |
| MRSN58 | Jun 2010, WRAMC, USA | Wound | - | ST1 / CST2 | JABU00000000 |
| NIPH 290 | Oct 1994, Příbram, Czech Republic | ICU | - | ST1 / CST2 | APRD00000000, [37] |
| AB307–0294 | 1994, Buffalo, New York, USA | Blood | - | ST1 / CST10 | CP001172, [33] |
| TG19582 | American Type Culture Collection | - | - | ST1 / CST11 | AMIV00000000, [43] |
| OIFC074 | Jun 2003, Landstahl Regional Medical Center, Landstahl, Germany | - | - | ST19 / CST13 | AMDE00000000 |
| MRSN 3405 | Mar 2011, WRAMC, USA | Wound | - | ST94 / CST13 | JNOU00000000 |
| NIPH 201 | Jul 1992, Liberec, Czech Republic | ICU | - | ST38 / CST35 | APQV00000000, [37] |
| ab233846 | USA | Sputum | - | ST126 / CST38 | JMOG00000000 |
| ab299505 | USA | Perirectal | - | ST508 / CST36 | JEWY00000000 |
| NIPH 615 | Jan 1994, Praha, Czech Republic | Burns unit | - | ST12 / CST39 | APOV00000000, [37] |
| TG27391 | Arizona State Labs, USA | - | - | ST427 / CST40 | ASGK00000000 |
| ab532279 | USA | Perirectal | - | ST519 / CST37 | JEYH00000000 |
| ab1106579 | USA | Perirectal | - | ST505 / CST33 | JEXN00000000 |
| Naval-82 | Oct 2006, National Naval Medical Center, Bethesda, Maryland, USA | Blood | - | ST428 / CST34 | AMSW00000000 |
| OIFC143 | Jul 2003, WRAMC, USA | - | - | ST25 / CST25 | AFDL00000000 |
| abC179 | Mar 2005, Iraq | Respiratory tract | From military personnel, combat-related | ST25 / CST26 | AVOD00000000, [45] |
| abCI86 | Feb 2005, Iraq | Superficial wound | From military personnel, combat-related | ST25 / CST26 | AVOB00000000, [45] |
| ab984213 | USA | Perirectal | - | ST25 / CST17 | JEVX00000000 |
| Naval-18 | Jun 2006, National Naval Medical Center, Bethesda, Maryland, USA | - | - | ST25 / CST27 | AFDA00000000 |
| AB-1650–8 | 2006, Arizona State Labs, USA | Bone (from hip) | - | ST113 / CST14 | AMHG00000000, [43] |
| ab1429530 | USA | Perirectal | - | ST25 / CST21 | JEWM00000000 |
| 107m | Colombia | - | - | ST25 / CST22 | CBSG00000000 |
| AB_2008–15–69 | 2008, Centers for Disease Control, USA | - | - | ST25 / CST18 | AMHN00000000, [43] |
| AB5256 | 2009, WRAMC, Maryland, USA | Blood | Representing a clonal group | ST25 / CST23 | AHAI00000000, [34] |
a ST, Sequence type; CST, CRISPR-based sequence type; PFGE, Pulsed-field gel electrophoresis; UAE, United Arab Emirates; WRAMC, Walter Reed Army Medical Center; USA, United States of America; ICU, Intensive care unit.