Skip to main content
. 2015 Feb 24;5:16. doi: 10.3389/fcimb.2015.00016

Table 2.

Conservation analyses for LuxR-solo proteins found in non-proteobacterial genomes.

LuxR proteins found in non-proteobacterial genomes Key aminoacids in autoinducer binding domain Key aminoacids in HTH domain
Accession number Species W Y D P W G E L G
57 61 70 71 85 113 178 182 188
I0JZG4 Methylacidiphilum fumariolicum L Y D P R G E I G
B3DZX3 Methylacidiphilum infernorum V4 L Y D P R G E L G
I7F7I3 Mycobacterium smegmatis ATCC700084 gap Y K E D G E L G
A0QRE0 Mycobacterium smegmatis ATCC700084 gap Y K P D G E L G
D9VGZ0 Streptomyces sp. AA4 gap Y C P R G E L G
D5ZSS7 Streptomyces ghanaensis ATCC 14672 gap Y D P W G E L G
C3JQB5 Rhodococcus erythropolis gap Y D P R G E L G
L8FJ08 Mycobacterium smegmatis MKD8 gap Y D P D G E L G
E6W1G5 Desulfurispirillum indicum strain ATCC BAA-1389 W Y D P R G E L G
D8PAV3 Nitrospira defluvii F Y D P gap C E L G
I0IPT9 Leptospirillum ferrooxidans strain C2-3 W Y D P gap G E L G

Each entry was aligned against TraR from Agrobacterium tumefaciens.