Table 2.
Conservation analyses for LuxR-solo proteins found in non-proteobacterial genomes.
| LuxR proteins found in non-proteobacterial genomes | Key aminoacids in autoinducer binding domain | Key aminoacids in HTH domain | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Accession number | Species | W | Y | D | P | W | G | E | L | G |
| 57 | 61 | 70 | 71 | 85 | 113 | 178 | 182 | 188 | ||
| I0JZG4 | Methylacidiphilum fumariolicum | L | Y | D | P | R | G | E | I | G |
| B3DZX3 | Methylacidiphilum infernorum V4 | L | Y | D | P | R | G | E | L | G |
| I7F7I3 | Mycobacterium smegmatis ATCC700084 | gap | Y | K | E | D | G | E | L | G |
| A0QRE0 | Mycobacterium smegmatis ATCC700084 | gap | Y | K | P | D | G | E | L | G |
| D9VGZ0 | Streptomyces sp. AA4 | gap | Y | C | P | R | G | E | L | G |
| D5ZSS7 | Streptomyces ghanaensis ATCC 14672 | gap | Y | D | P | W | G | E | L | G |
| C3JQB5 | Rhodococcus erythropolis | gap | Y | D | P | R | G | E | L | G |
| L8FJ08 | Mycobacterium smegmatis MKD8 | gap | Y | D | P | D | G | E | L | G |
| E6W1G5 | Desulfurispirillum indicum strain ATCC BAA-1389 | W | Y | D | P | R | G | E | L | G |
| D8PAV3 | Nitrospira defluvii | F | Y | D | P | gap | C | E | L | G |
| I0IPT9 | Leptospirillum ferrooxidans strain C2-3 | W | Y | D | P | gap | G | E | L | G |
Each entry was aligned against TraR from Agrobacterium tumefaciens.