Table 2.
Bivariate correlation coefficients between recombination rate and all di-nucleotide motifs that were significantly* correlated with local recombination rate in the eight different maps, its average and variance
| Motif: | Solignac map | Grooming map | VSH map | JH map | HBC map | LBC map | R3 map | R5 map | Average recombination rate | Variance of recombination rate |
|---|---|---|---|---|---|---|---|---|---|---|
| AA | -0.10 | -0.10 | -0.15 | -0.10 | --- | --- | --- | --- | -0.13 | --- |
| AC | 0.06 | 0.17 | 0.19 | 0.12 | --- | 0.08 | 0.10 | --- | 0.17 | --- |
| AG | 0.09 | 0.21 | 0.24 | 0.17 | --- | 0.09 | 0.10 | --- | 0.22 | --- |
| AT | -0.11 | -0.16 | -0.20 | -0.15 | --- | -0.09 | -0.08 | --- | -0.18 | --- |
| CA | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
| CC | 0.14 | 0.26 | 0.33 | 0.22 | --- | 0.16 | 0.14 | --- | 0.30 | --- |
| CG | 0.14 | 0.27 | 0.33 | 0.23 | --- | 0.17 | 0.16 | --- | 0.32 | --- |
| CT | 0.08 | 0.20 | 0.23 | 0.16 | --- | 0.10 | 0.11 | --- | 0.21 | --- |
| GA | 0.09 | 0.24 | 0.26 | 0.19 | --- | 0.11 | 0.11 | --- | 0.24 | --- |
| GC | 0.14 | 0.25 | 0.32 | 0.22 | --- | 0.17 | 0.15 | --- | 0.30 | --- |
| GG | 0.14 | 0.27 | 0.33 | 0.23 | --- | 0.16 | 0.14 | --- | 0.31 | --- |
| GT | 0.06 | 0.18 | 0.20 | 0.13 | --- | 0.10 | 0.11 | --- | 0.19 | --- |
| TA | -0.11 | -0.18 | -0.22 | -0.17 | --- | -0.10 | -0.09 | --- | -0.20 | --- |
| TC | 0.08 | 0.23 | 0.26 | 0.19 | --- | 0.12 | 0.12 | --- | 0.24 | --- |
| TG | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
| TT | -0.10 | -0.10 | -0.14 | -0.10 | --- | --- | --- | --- | -0.12 | --- |
| CG/GC ratio | 0.09 | 0.23 | 0.20 | 0.17 | --- | 0.10 | 0.11 | --- | 0.23 | --- |
*Significance for FDR < 0.05; FDR < 0.01 is indicated in bold.