Table 4. Estimates of nucleotide diversity of A vs At and D vs Dt for eight COL genes in cotton according to their genomic sequences.
Gene | A1-At | D5-Dt |
---|---|---|
combined sequence | 0.00586 | 0.01051** |
COL1 | 0.00605 | 0.00532 |
COL2 | 0.00624 | 0.00848** |
COL3 | 0.0039 | 0.00827** |
COL4 | 0.00678 | 0.01201** |
COL5 | 0.00161 | 0.00584** |
COL6 | 0.01124** | 0.00536 |
COL7 | 0.0048 | 0.00575** |
COL8 | 0.00631 | 0.02956** |
average | 0.00587 | 0.01007 |
Taxa include 23 allotetraploids accessions and the two genome donors to the allotetraploid accessions. At = A genome from the allotetraploid cotton species; Dt = D genome from the allotetraploid cotton species; D5 = G. raimondii; A1 = G. herbaceum.
** P<0.01