Table 2. Summary of haplotypes identified in this study, the corresponding frequency at which they were identified, and host species within which they originated (L = Lesser Scaup, M = Mallard, N = Northern Pintail, S = Northern Shoveler, T = American Green-winged Teal, W = American Wigeon).
Detection in Pacific Americas Flyway Ducks | BLAST results | |||||||
---|---|---|---|---|---|---|---|---|
Haplotype | Accession | Frequency total | Species of origin | Accession | Identity | MalAvi lineage | Avian host/vector | |
Haemoproteus | DUCK01 | KM386316 | 255 | LMPSTW | JQ314226 | 100 | TUSW07 | Cygnus columbianas |
DUCK02 | KM386317 | 55 | LMPSTW | JQ314225 | 100 | TUSW06 | Cygnus columbianas | |
DUCK03 | KM386318 | 1 | P | JQ314226 | 99 | TUSW07 | Cygnus columbianas | |
DUCK04 | KM386319 | 1 | M | JQ314226 | 99 | TUSW07 | Cygnus columbianas | |
DUCK05 | KM386320 | 1 | M | JQ314226 | 99 | TUSW07 | Cygnus columbianas | |
DUCK06 | KM386321 | 1 | L | JQ314225 | 99 | TUSW06 | Cygnus columbianas | |
DUCK07 | KM386322 | 1 | P | JQ314225 | 99 | TUSW06 | Cygnus columbianas | |
DUCK08 | KM386323 | 1 | M | JQ314226 | 99 | TUSW07 | Cygnus columbianas | |
Plasmodium | DUCK09 | KM386357 | 144 | LMPSTW | HF543643 | 100 | BT7 | Milvus sp |
DUCK10 | KM386358 | 51 | MPSTW | AB741489 | 100 | Mallard partial | Anas platyrhynchos | |
DUCK11 | KM386359 | 1 | P | DQ368392 | 100 | SYBOR2 | Sylvia borin | |
DUCK12 | KM386360 | 1 | L | KC867673 | 100 | BOBOVT | Dolichonyx oryzivorus | |
DUCK13 | KM386361 | 1 | L | KC867677 | 100 | BOBO | Dolichonyx oryzivorus | |
DUCK14 | KM386362 | 1 | T | AB741489 | 99 | Anas platyrhynchos 4 | Anas platyrhynchos | |
DUCK15 | KM386363 | 1 | W | HF543643 | 99 | ENV | Milvus sp | |
Leucocytozoon | DUCK16 | KM386324 | 38 | MPSTW | JQ314224 | 100 | TUSW05 | Cygnus columbianas |
DUCK17 | KM386325 | 3 | MS | JQ314224 | 99 | TUSW05 | Cygnus columbianas | |
DUCK18 | KM386326 | 78 | MPTW | KC409122 | 100 | NOPI04 | Anas acuta | |
DUCK19 | KM386327 | 208 | LMPSTW | JQ314223 | 100 | TUSW04 | Cygnus columbianas | |
DUCK20 | KM386328 | 3 | M | KC409123 | 99 | NOPI05 | Anas acuta | |
DUCK21 | KM386329 | 69 | MPTW | AB743872 | 100 | Anas crecca | Anas crecca | |
DUCK22 | KM386330 | 8 | MPTW | AB743872 | 99 | Anas crecca | Anas crecca | |
DUCK23 | KM386331 | 17 | MPT | AB741516 | 99 | Cygnus cygnus | Cygnus cygnus | |
DUCK24 | KM386332 | 36 | MP | KC409123 | 100 | NOPI05 | Anas acuta | |
DUCK25 | KM386333 | 12 | LS | HF543635 | 96 | MILVUS02 | Milvus sp | |
DUCK26 | KM386334 | 2 | P | KC409122 | 99 | NOPI04 | Anas acuta | |
DUCK27 | KM386335 | 1 | P | KC409122 | 99 | NOPI04 | Anas acuta | |
DUCK28 | KM386336 | 1 | P | JQ314223 | 99 | TUSW04 | Cygnus columbianas | |
DUCK29 | KM386337 | 1 | M | EF032867 | 99 | IHELLI1 | Black fly, vector | |
DUCK30 | KM386338 | 1 | L | EF032867 | 100 | IHELLI1 | Black fly, vector | |
DUCK31 | KM386339 | 1 | L | JQ314223 | 99 | TUSW04 | Cygnus columbianas | |
DUCK32 | KM386340 | 1 | P | AB743872 | 99 | Anas crecca | Anas crecca | |
DUCK33 | KM386341 | 1 | L | HF543635 | 96 | MILVUS02 | Milvus sp | |
DUCK34 | KM386342 | 1 | T | AB743872 | 99 | Anas crecca | Anas crecca | |
DUCK35 | KM386343 | 1 | M | KC409123 | 99 | NOPI05 | Anas acuta | |
DUCK36 | KM386344 | 2 | PW | JQ314223 | 99 | TUSW04 | Cygnus columbianas | |
DUCK37 | KM386345 | 6 | MPTW | KC409119 | 100 | NOPI01 | Anas acuta | |
DUCK38 | KM386346 | 1 | P | AB743872 | 99 | Anas crecca | Anas crecca | |
DUCK39 | KM386347 | 2 | T | AB743872 | 99 | Anas crecca | Anas crecca | |
DUCK40 | KM386348 | 7 | TW | KC409127 | 100 | NOPI09 | Anas acuta | |
DUCK41 | KM386349 | 4 | TW | KC409126 | 100 | NOPI08 | Anas acuta | |
DUCK42 | KM386350 | 2 | W | KC409119 | 99 | NOPI01 | Anas acuta | |
DUCK43 | KM386351 | 1 | S | KC409119 | 99 | NOPI01 | Anas acuta | |
DUCK44 | KM386352 | 1 | P | JQ314223 | 99 | TUSW04 | Cygnus columbianas | |
DUCK45 | KM386353 | 1 | T | JQ314223 | 99 | TUSW04 | Cygnus columbianas | |
DUCK46 | KM386354 | 1 | T | JQ314223 | 99 | TUSW04 | Cygnus columbianas | |
DUCK47 | KM386355 | 1 | W | KC409119 | 99 | NOPI01 | Anas acuta | |
DUCK48 | KM386356 | 1 | W | AB741516 | 99 | Cygnus cygnus 4 | Cygnus cygnus |