Table 2. Calculated Binding Energies and RMSD of Ouabain and Analogs from Molecular Docking Experiments.
docked ligand | binding energy (Amber score), kcal/mol | RMSD (non-hydrogen atoms) | Na+/K+ ATPase | cell migration |
---|---|---|---|---|
1 | –5420.51 | 0.0000 | 0.105 | 0.173 |
2 | –5399.66 | 0.5807 | 0.669 | 0.790 |
3 | –5412.08 | 0.9367 | 2.6 | 4.3 |
4 | –5584.89 | 6.5933 | 12.4 | 30.9 |